RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 CCDC12Q8WUD4 166 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 PHF20Q9BVI0 1012 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 CWC22Q9HCG8 908 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 NPDC1Q9NQX5 325 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 RBPJLQ9UBG7 517 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 RABGAP1Q9Y3P9 1069 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 RIPK3Q9Y572 518 aa9.64□□□□□ -0.87
GAPVD1-213ENST00000469498 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 SMCO2A6NFE2 343 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 NFIBO00712 420 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 OPLAHO14841 1288 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 ATP2A1O14983 1001 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 MMP1P03956 469 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 DDIT3P35638 169 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 UBE2SQ16763 222 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 WDR78Q5VTH9 848 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 THSD4Q6ZMP0 1018 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 FERMT3Q86UX7 667 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 NCAPG2Q86XI2 1143 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 DIS3L2Q8IYB7 885 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 FBXO18Q8NFZ0 1043 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 TRERF1Q96PN7 1200 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 MOV10L1Q9BXT6 1211 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 C6orf50Q9HD87 102 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 MTMR6Q9Y217 621 aa9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-213ENST00000469498 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 CFBP00751 764 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 BCRP11274 1271 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 ERCC3P19447 782 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 CALML3P27482 149 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 HOXA13P31271 388 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 KRT2P35908 639 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 MAP2K2P36507 400 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 TRAF1Q13077 416 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PTGDRQ13258 359 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 GNL2Q13823 731 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 LAPTM4AQ15012 233 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 SAFBQ15424 915 aaKnown RBP eCLIP9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 NPY5RQ15761 445 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 Q3C1V9 767 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 TKFCQ3LXA3 575 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 NSMFQ6X4W1 530 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 SLC30A10Q6XR72 485 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 RIOX2Q8IUF8 465 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 BLIDQ8IZY5 108 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 GPRC5AQ8NFJ5 357 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 CLEC4DQ8WXI8 215 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 CUL5Q93034 780 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 ZMYND12Q9H0C1 365 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PORCNQ9H237 461 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 R3HDMLQ9H3Y0 253 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 ACAD9Q9H845 621 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PSTPIP2Q9H939 334 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 BRMS1Q9HCU9 246 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 TMEM260Q9NX78 707 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 PCDHA4Q9UN74 947 aa9.62□□□□□ -0.87
GAPVD1-213ENST00000469498 MYH9P35579 1960 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 BTBD18B2RXH4 712 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 CA12O43570 354 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 TLR2O60603 784 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 TRPA1O75762 1119 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 CCNA1P78396 465 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 NR5A1Q13285 461 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 JAKMIP3Q5VZ66 844 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 USP17L6PQ6QN14 398 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 REXO1Q8N1G1 1221 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 DAGLBQ8NCG7 672 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 TBC1D5Q92609 795 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 RNF186Q9NXI6 227 aa9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 BIN2Q9UBW5 565 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-213ENST00000469498 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 BRD1O95696 1058 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 SLC25A27O95847 323 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 F13A1P00488 732 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 POLR2MP0CAP2 368 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 GNA11P29992 359 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 COPB2P35606 906 aa9.6□□□□□ -0.87
GAPVD1-213ENST00000469498 MRPL12P52815 198 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms