RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CCDC8Q9H0W5 538 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-217ENST00000469223 ABHD14A-ACY1A0A1B0GW23 586 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 USP17L21D6R901 530 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 E9PSI1 815 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 F5H6K3 240 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 TBX10O75333 385 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 CXCL10P02778 98 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 SELPP16109 830 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 OAZ1P54368 228 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 KLRC3Q07444 240 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 PTGISQ16647 500 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
HDAC6-217ENST00000469223 ARMT1Q9H993 441 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 INSL6Q9Y581 213 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 ZNF532Q9HCE3 1301 aa15.14■□□□□ 0.01
HDAC6-217ENST00000469223 H3BNC9 293 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 PRKAB2O43741 272 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 PTPN11Q06124 597 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-217ENST00000469223 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-217ENST00000469223 DHX38Q92620 1227 aaKnown RBP15.13■□□□□ 0.01
HDAC6-217ENST00000469223 CTAGE1Q96RT6 745 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 KIAA1671Q9BY89 1806 aa15.13■□□□□ 0.01
HDAC6-217ENST00000469223 EFCAB14O75071 495 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 GNAI2P04899 355 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 AVPR2P30518 371 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC6-217ENST00000469223 SIGLEC14Q08ET2 396 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 HYAL1Q12794 435 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-217ENST00000469223 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC6-217ENST00000469223 MYOCDQ8IZQ8 938 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 SAMD11Q96NU1 681 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
HDAC6-217ENST00000469223 CD207Q9UJ71 328 aa15.12■□□□□ 0.01
HDAC6-217ENST00000469223 MBD4O95243 580 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 HTRA4P83105 476 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-217ENST00000469223 IKBKEQ14164 716 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 BRDTQ58F21 947 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-217ENST00000469223 FBXO11Q86XK2 927 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 AMOTL1Q8IY63 956 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 EAF2Q96CJ1 260 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-217ENST00000469223 ASIC4Q96FT7 647 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 RAD50Q92878 1312 aa15.11■□□□□ 0.01
HDAC6-217ENST00000469223 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 LINC01565O15544 149 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 NCK2O43639 380 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 CSPG5O95196 566 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 ALAS1P13196 640 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 GTF2F1P35269 517 aaKnown RBP eCLIP15.1■□□□□ 0.013e-6■■■■□ 25.9
HDAC6-217ENST00000469223 NBL1P41271 181 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 GDF6Q6KF10 455 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-217ENST00000469223 TMEM192Q8IY95 271 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 ATP8A2Q9NTI2 1148 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
HDAC6-217ENST00000469223 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
HDAC6-217ENST00000469223 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-217ENST00000469223 PARNO95453 639 aaKnown RBP15.09■□□□□ 0.01
HDAC6-217ENST00000469223 PDGFBP01127 241 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-217ENST00000469223 AMHP03971 560 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 CKBP12277 381 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 RBL2Q08999 1139 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 MBTPS1Q14703 1052 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 MORC4Q8TE76 937 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 TRERF1Q96PN7 1200 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 YME1L1Q96TA2 773 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 NYAP2Q9P242 653 aa15.09■□□□□ 0.01
HDAC6-217ENST00000469223 KIAA1217Q5T5P2 1943 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 LOC730098B7Z3J9 87 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
HDAC6-217ENST00000469223 POLA2Q14181 598 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 PPP2R5BQ15173 497 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 NSMFQ6X4W1 530 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 FRMD5Q7Z6J6 570 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 ADSSL1Q8N142 457 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 LRRC47Q8N1G4 583 aaKnown RBP15.08■□□□□ 0
HDAC6-217ENST00000469223 COPS5Q92905 334 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 IGFLR1Q9H665 355 aa15.08■□□□□ 0
HDAC6-217ENST00000469223 A6NJR5 290 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 RASA1P20936 1047 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 CTNNB1P35222 781 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 NDUFV1P49821 464 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
HDAC6-217ENST00000469223 TKFCQ3LXA3 575 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 SLFNL1Q499Z3 407 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 STK11IPQ8N1F8 1099 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 NKD2Q969F2 451 aaPredicted RBP15.07■□□□□ 0
HDAC6-217ENST00000469223 INCENPQ9NQS7 918 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
HDAC6-217ENST00000469223 OTOGLQ3ZCN5 2332 aa15.06■□□□□ 0
HDAC6-217ENST00000469223 RBM47A0AV96 593 aaKnown RBP15.06■□□□□ 0
HDAC6-217ENST00000469223 TMEM232C9JQI7 657 aa15.06■□□□□ 0
HDAC6-217ENST00000469223 KPNA6O60684 536 aa15.06■□□□□ 0
HDAC6-217ENST00000469223 LGR5O75473 907 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms