RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 CAPN2P17655 700 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
SNU13-206ENST00000469028 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
SNU13-206ENST00000469028 SCRN1Q12765 414 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 PKN1Q16512 942 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 GJC2Q5T442 439 aaPredicted RBP12.68□□□□□ -0.38
SNU13-206ENST00000469028 USP17L6PQ6QN14 398 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
SNU13-206ENST00000469028 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 SYNRGQ9UMZ2 1314 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 RBM47A0AV96 593 aaKnown RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 MYADML2A6NDP7 307 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 PGK1P00558 417 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 COL6A1P12109 1028 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 SMPD1P17405 629 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 NEK4P51957 841 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 PDE4DQ08499 809 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 LRRC41Q15345 812 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 PFKFB3Q16875 520 aaPredicted RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 NOL8Q76FK4 1167 aaKnown RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 IL31RAQ8NI17 732 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 PDCD2LQ9BRP1 358 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 BARHL2Q9NY43 387 aa12.67□□□□□ -0.38
SNU13-206ENST00000469028 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
SNU13-206ENST00000469028 DNM1LO00429 736 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 CTAGE5O15320 804 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 PFKFB2O60825 505 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 DTNBO60941 627 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
SNU13-206ENST00000469028 NR3C2P08235 984 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 SCG2P13521 617 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 NAPAP54920 295 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 TNFAIP2Q03169 654 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 PGM5Q15124 567 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 UBE2SQ16763 222 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 ME3Q16798 604 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 NECAB2Q7Z6G3 386 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
SNU13-206ENST00000469028 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 SLC26A6Q9BXS9 759 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 C11orf49Q9H6J7 331 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
SNU13-206ENST00000469028 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 RGS20O76081 388 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 ARIH2O95376 493 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 GJA9P57773 515 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 STXBP2Q15833 593 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 ARRDC4Q8NCT1 418 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
SNU13-206ENST00000469028 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
SNU13-206ENST00000469028 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 B4DLN1 442 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 CPLX1O14810 134 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 MYCLP12524 364 aaPredicted RBP12.64□□□□□ -0.39
SNU13-206ENST00000469028 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
SNU13-206ENST00000469028 NKX3-2P78367 333 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 DUSP28Q4G0W2 176 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 COPS5Q92905 334 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 CUL5Q93034 780 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 GTF3C6Q969F1 213 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 WDR11Q9BZH6 1224 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
SNU13-206ENST00000469028 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
SNU13-206ENST00000469028 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
SNU13-206ENST00000469028 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
SNU13-206ENST00000469028 EIF3JO75822 258 aaKnown RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 C6orf222P0C671 652 aaPredicted RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 ADCY7P51828 1080 aa12.63□□□□□ -0.39
SNU13-206ENST00000469028 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 BEX3Q00994 111 aa12.63□□□□□ -0.39
SNU13-206ENST00000469028 AKAP17AQ02040 695 aaKnown RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 SSRP1Q08945 709 aaKnown RBP12.63□□□□□ -0.39
SNU13-206ENST00000469028 CCDC62Q6P9F0 684 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms