RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MUM1L1Q5H9M0 696 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 JAKMIP3Q5VZ66 844 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 BRAPQ7Z569 592 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 PLEKHH3Q7Z736 793 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 FCHSD1Q86WN1 690 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 MAF1Q9H063 256 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 MAP3K20Q9NYL2 800 aaKnown RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-216ENST00000468949 PTPN22Q9Y2R2 807 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 PARP14Q460N5 1801 aa9.28□□□□□ -0.92
HDAC6-216ENST00000468949 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 PEX10O60683 326 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.93
HDAC6-216ENST00000468949 RPS6P62753 249 aaKnown RBP9.27□□□□□ -0.93
HDAC6-216ENST00000468949 NONOQ15233 471 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC6-216ENST00000468949 ARHGEF16Q5VV41 709 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 USP17L6PQ6QN14 398 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 SLC30A10Q6XR72 485 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 PIK3AP1Q6ZUJ8 805 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 GPR142Q7Z601 462 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 DPP9Q86TI2 863 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 NOSTRINQ8IVI9 506 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 RASGRP4Q8TDF6 673 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 SOCS4Q8WXH5 440 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 ARHGAP39Q9C0H5 1083 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 PORCNQ9H237 461 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
HDAC6-216ENST00000468949 ADD3Q9UEY8 706 aaKnown RBP9.27□□□□□ -0.93
HDAC6-216ENST00000468949 MTMR6Q9Y217 621 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 RIPK3Q9Y572 518 aa9.27□□□□□ -0.93
HDAC6-216ENST00000468949 COL11A1P12107 1806 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-216ENST00000468949 BAZ2BQ9UIF8 2168 aaKnown RBP9.26□□□□□ -0.93
HDAC6-216ENST00000468949 BTBD18B2RXH4 712 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 STRNO43815 780 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 F13A1P00488 732 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 HOXD10P28358 340 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 ZNF76P36508 570 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 PSMC4P43686 418 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 HSD17B4P51659 736 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 SOX10P56693 466 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 CAP1Q01518 475 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 NR5A1Q13285 461 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 BAATQ14032 418 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-216ENST00000468949 Q3C1V9 767 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 SLC9C1Q4G0N8 1177 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 ABRAQ8N0Z2 381 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 CLEC4DQ8WXI8 215 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 ARMC5Q96C12 935 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 ZNF396Q96N95 335 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-216ENST00000468949 NAP1L4Q99733 375 aaKnown RBP9.26□□□□□ -0.93
HDAC6-216ENST00000468949 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 CYP39A1Q9NYL5 469 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 PTCH2Q9Y6C5 1203 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 RLFQ13129 1914 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 HTTP42858 3142 aa9.26□□□□□ -0.93
HDAC6-216ENST00000468949 SLC15A5A6NIM6 579 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 MEIS2O14770 477 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 BRD1O95696 1058 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 EIF2AK2P19525 551 aaKnown RBP9.25□□□□□ -0.93
HDAC6-216ENST00000468949 ATP2B1P20020 1258 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 ADORA2AP29274 412 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 RGS2P41220 211 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-216ENST00000468949 RILPL1Q5EBL4 403 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-216ENST00000468949 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 DNERQ8NFT8 737 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-216ENST00000468949 NSUN6Q8TEA1 469 aaKnown RBP9.25□□□□□ -0.93
HDAC6-216ENST00000468949 PGBD1Q96JS3 809 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 RMDN3Q96TC7 470 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 TMEM260Q9NX78 707 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 SRRDQ9UH36 339 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 TCEAL9Q9UHQ7 104 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 CEP131Q9UPN4 1083 aa9.25□□□□□ -0.93
HDAC6-216ENST00000468949 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 KIF28PB7ZC32 967 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 OPLAHO14841 1288 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 MARCH6O60337 910 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 PGK2P07205 417 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 PTPREP23469 700 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 U2AF2P26368 475 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC6-216ENST00000468949 CTGFP29279 349 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 CCND2P30279 289 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
HDAC6-216ENST00000468949 ARHGAP4P98171 946 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 PDE4DQ08499 809 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 RESTQ13127 1097 aa9.24□□□□□ -0.93
HDAC6-216ENST00000468949 PKP1Q13835 747 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms