RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 ESYT1Q9BSJ8 1104 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 LSG1Q9H089 658 aaKnown RBP8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 SENP2Q9HC62 589 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 TBX21Q9UL17 535 aa8.34□□□□□ -1.07
SNRPD3-205ENST00000468770 PNMA6FA0A0J9YX94 578 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 SLC27A2O14975 620 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 PRC1O43663 620 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 KPNA6O60684 536 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 CD4P01730 458 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 NR3C2P08235 984 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 KIF5BP33176 963 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 EPHB4P54760 987 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 ANTXR2P58335 489 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 PPIGQ13427 754 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 Q7L0L9 218 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 SKAP1Q86WV1 359 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 SAMD3Q8N6K7 520 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 SLC43A3Q8NBI5 491 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 CTCFLQ8NI51 663 aaPredicted RBP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 COPS5Q92905 334 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 PIGSQ96S52 555 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 MTA3Q9BTC8 594 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 RIOX1Q9H6W3 641 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 COL20A1Q9P218 1284 aa8.33□□□□□ -1.08
SNRPD3-205ENST00000468770 GRIN2DO15399 1336 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 A6NJR5 290 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 GCOM1H8Y6P7 765 aaPredicted RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CYTH3O43739 400 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 GH1P01241 217 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 SUPT20HL2P0C7V6 817 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 POLR2MP0CAP2 368 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 MYCLP12524 364 aaPredicted RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CSF2RAP15509 400 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CYP2C18P33260 490 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 HSD17B4P51659 736 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 PURAQ00577 322 aaKnown RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 LY6KQ17RY6 165 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CREB3L3Q68CJ9 461 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 FAM109BQ6ICB4 259 aaPredicted RBP8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CCDC62Q6P9F0 684 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 ZNF654Q8IZM8 581 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 TMEM87BQ96K49 555 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 MAP3K14Q99558 947 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 TRPV6Q9H1D0 765 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 HIPK3Q9H422 1215 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 LY9Q9HBG7 655 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 MTMR10Q9NXD2 777 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 LCTP09848 1927 aa8.32□□□□□ -1.08
SNRPD3-205ENST00000468770 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 MYH6P13533 1939 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 OPLAHO14841 1288 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 B4GALT4O60513 344 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 DDAH1O94760 285 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 ARIH2O95376 493 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 CALM1P0DP23 149 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 CALM2P0DP24 149 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 CALM3P0DP25 149 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SMARCA1P28370 1054 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 LIFRP42702 1097 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 GNAQP50148 359 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 GHRHRQ02643 423 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SLC35G1Q2M3R5 365 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 FAM47CQ5HY64 1035 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 VSIG10LQ86VR7 867 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 AFG1LQ8WV93 481 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 FAM161BQ96MY7 647 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.087e-14■□□□□ 10.1
SNRPD3-205ENST00000468770 PDCD2LQ9BRP1 358 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 MYL10Q9BUA6 226 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 TRMT13Q9NUP7 481 aaKnown RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SEC63Q9UGP8 760 aaKnown RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms