RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 SEMA6CQ9H3T2 930 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 ACSS3Q9H6R3 686 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 WASHC2AQ641Q2 1341 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 SSU72P8A0A1W2PR75 194 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 HYAL3O43820 417 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 GSNP06396 782 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 NBPF7P0C2Y1 421 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 ELNP15502 786 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 LTBRP36941 435 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 PREPP48147 710 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 FAPQ12884 760 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 NFKBIBQ15653 356 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 RGL3Q3MIN7 710 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 SFRP5Q5T4F7 317 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 CRTC3Q6UUV7 619 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 TCEAL8Q8IYN2 117 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 SMC1BQ8NDV3 1235 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 FRS2Q8WU20 508 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 DIO2Q92813 273 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 ZFYVE21Q9BQ24 234 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 AKTIPQ9H8T0 292 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRDM5Q9NQX1 630 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 CATSPERZQ9NTU4 200 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRR13Q9NZ81 148 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 CLEC1BQ9P126 229 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 ZNF652Q9Y2D9 606 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 ST14Q9Y5Y6 855 aa4.8□□□□□ -1.64
HMGB1P25-201ENST00000468402 PTPDC1A2A3K4 754 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 VSTM5A8MXK1 200 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 F8W735 103 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 GSTA4O15217 222 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 DYNC1LI2O43237 492 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRPF3O43395 683 aaKnown RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 ULK1O75385 1050 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 KRT37O76014 449 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 LDHAP00338 332 aaKnown RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 U2AF1L5P0DN76 240 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 PLS3P13797 630 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 KCNA6P17658 529 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 IARSP41252 1262 aaKnown RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 LSSP48449 732 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 U2AF1Q01081 240 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 CLUL1Q15846 466 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 MCTP1Q6DN14 999 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 SHISA2Q6UWI4 295 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 RSPO2Q6UXX9 243 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 ILDR2Q71H61 639 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 TPH2Q8IWU9 490 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 CISD2Q8N5K1 135 aaKnown RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 MAGEB6Q8N7X4 407 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 KREMEN2Q8NCW0 462 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 FUBP3Q96I24 572 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 LRGUKQ96M69 825 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 MCMBPQ9BTE3 642 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 KCNF1Q9H3M0 494 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 EMC7Q9NPA0 242 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 CRTAC1Q9NQ79 661 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 GPR27Q9NS67 375 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 SPTLC3Q9NUV7 552 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 MKS1Q9NXB0 559 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 TMEFF2Q9UIK5 374 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 RCAN3Q9UKA8 241 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 PCDHA2Q9Y5H9 948 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 MRFAP1Q9Y605 127 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 UNC13AQ9UPW8 1703 aa4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 COL17A1Q9UMD9 1497 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P25-201ENST00000468402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 FAM95CA0A1B0GW59 222 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 CCDC66A2RUB6 948 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 RBAK-RBAKDNI3L0D1 243 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 AURKAO14965 403 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 XPOTO43592 962 aaKnown RBP4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 MYO1BO43795 1136 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 CREB3O43889 395 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 MSCO60682 206 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 GSTM1P09488 218 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 PF4V1P10720 104 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 BMP3P12645 472 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 IFNGR1P15260 489 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 GRIK1P39086 918 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 IRAK1P51617 712 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 NRG1Q02297 640 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 DSG1Q02413 1049 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 KCNAB2Q13303 367 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 DDB1Q16531 1140 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 SGO2Q562F6 1265 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 NXNQ6DKJ4 435 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 IQCEQ6IPM2 695 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 LBX2Q6XYB7 198 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 TSHZ1Q6ZSZ6 1077 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 TXNRD3Q86VQ6 643 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 TMEM130Q8N3G9 435 aa4.78□□□□□ -1.64
HMGB1P25-201ENST00000468402 DTWD2Q8NBA8 298 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms