RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
COMMD3-206ENST00000468179 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
COMMD3-206ENST00000468179 PIGSQ96S52 555 aa16.93■□□□□ 0.3
COMMD3-206ENST00000468179 RMDN3Q96TC7 470 aa16.93■□□□□ 0.3
COMMD3-206ENST00000468179 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
COMMD3-206ENST00000468179 PDGFCQ9NRA1 345 aa16.93■□□□□ 0.3
COMMD3-206ENST00000468179 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
COMMD3-206ENST00000468179 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
COMMD3-206ENST00000468179 ADCY6O43306 1168 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 HSD17B4P51659 736 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 GHRHRQ02643 423 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 TLE2Q04725 743 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 TTLL4Q14679 1199 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 PPP2R5BQ15173 497 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 TAAR1Q96RJ0 339 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
COMMD3-206ENST00000468179 PRDM5Q9NQX1 630 aaPredicted RBP16.92■□□□□ 0.3
COMMD3-206ENST00000468179 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 MYADML2A6NDP7 307 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 GCOM1H8Y6P7 765 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-206ENST00000468179 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
COMMD3-206ENST00000468179 SLC34A2O95436 690 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 CLTBP09497 229 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 POLR2MP0CAP2 368 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 CPT1AP50416 773 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 ANKRD33Q7Z3H0 272 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 SGMS1Q86VZ5 419 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
COMMD3-206ENST00000468179 ARVCFO00192 962 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 CTAGE5O15320 804 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 CYTH3O43739 400 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 KPNA6O60684 536 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 PPP1R11O60927 126 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 FGD1P98174 961 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 MDM2Q00987 491 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 BEX3Q00994 111 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 MYL10Q9BUA6 226 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
COMMD3-206ENST00000468179 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
COMMD3-206ENST00000468179 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
COMMD3-206ENST00000468179 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
COMMD3-206ENST00000468179 TDHQ8IZJ6 230 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 CUL5Q93034 780 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 PDLIM7Q9NR12 457 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 TMEM39AQ9NV64 488 aa16.89■□□□□ 0.29
COMMD3-206ENST00000468179 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
COMMD3-206ENST00000468179 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 NR3C2P08235 984 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 RAG1P15918 1043 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 EIF2AK2P19525 551 aaKnown RBP16.88■□□□□ 0.29
COMMD3-206ENST00000468179 PSMA5P28066 241 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 HSPA4P34932 840 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 CDK7P50613 346 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 EXOSC10Q01780 885 aaKnown RBP16.88■□□□□ 0.29
COMMD3-206ENST00000468179 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 CXCL17Q6UXB2 119 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 COL20A1Q9P218 1284 aa16.88■□□□□ 0.29
COMMD3-206ENST00000468179 OPLAHO14841 1288 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 KIAA0355O15063 1070 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-206ENST00000468179 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 SEPT14Q6ZU15 432 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 PIBF1Q8WXW3 757 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 KCNB2Q92953 911 aa16.87■□□□□ 0.29
COMMD3-206ENST00000468179 MCM3APO60318 1980 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 ZBTB43O43298 467 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 GH1P01241 217 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 CCND2P30279 289 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-206ENST00000468179 RCAN1P53805 252 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 ITGA7Q13683 1181 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 BLOC1S2Q6QNY1 142 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
COMMD3-206ENST00000468179 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
COMMD3-206ENST00000468179 CEP290O15078 2479 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 TRIM43BA6NCK2 446 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 A6NJR5 290 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
COMMD3-206ENST00000468179 STAM2O75886 525 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 PLEKHA8P1O95397 391 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-206ENST00000468179 RXRAP19793 462 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 FAAP100Q0VG06 881 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 CCDC62Q6P9F0 684 aa16.85■□□□□ 0.29
COMMD3-206ENST00000468179 TMTC3Q6ZXV5 915 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms