RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 GRK4P32298 578 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 PTPN11Q06124 597 aaPredicted RBP5.88□□□□□ -1.47
SSR3-204ENST00000467733 SV2BQ7L1I2 683 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
SSR3-204ENST00000467733 SMC1BQ8NDV3 1235 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 ZCRB1Q8TBF4 217 aaKnown RBP5.88□□□□□ -1.47
SSR3-204ENST00000467733 XAGE3Q8WTP9 111 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 KDM2BQ8NHM5 1336 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 SBNO2Q9Y2G9 1366 aa5.88□□□□□ -1.47
SSR3-204ENST00000467733 EDC4Q6P2E9 1401 aaKnown RBP5.88□□□□□ -1.47
SSR3-204ENST00000467733 COL5A3P25940 1745 aaPredicted RBP5.88□□□□□ -1.47
SSR3-204ENST00000467733 FITM1A5D6W6 292 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 LMNB1P20700 586 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 RPS26P62854 115 aaKnown RBP5.87□□□□□ -1.47
SSR3-204ENST00000467733 DLG4P78352 724 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 FMR1Q06787 632 aaKnown RBP eCLIP5.87□□□□□ -1.47
SSR3-204ENST00000467733 CCDC27Q2M243 656 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.87□□□□□ -1.47
SSR3-204ENST00000467733 BAHD1Q8TBE0 780 aaPredicted RBP5.87□□□□□ -1.47
SSR3-204ENST00000467733 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
SSR3-204ENST00000467733 C20orf173Q96LM9 149 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 MCOLN1Q9GZU1 580 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 ADAMTS10Q9H324 1103 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 ZCCHC4Q9H5U6 513 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 GPATCH2Q9NW75 528 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 DUSP13Q9UII6 198 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 ZNF831Q5JPB2 1677 aa5.87□□□□□ -1.47
SSR3-204ENST00000467733 VIRMAQ69YN4 1812 aaKnown RBP5.86□□□□□ -1.47
SSR3-204ENST00000467733 DLEC1Q9Y238 1755 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 CGNL1Q0VF96 1302 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 RFXAPO00287 272 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 USP17L7P0C7H9 530 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 TPP2P29144 1249 aaPredicted RBP5.86□□□□□ -1.47
SSR3-204ENST00000467733 TGFB2P61812 414 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 NR0B2Q15466 257 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 GAB4Q2WGN9 574 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 C9orf131Q5VYM1 1079 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 SLC6A19Q695T7 634 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 TTBK2Q6IQ55 1244 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 NME9Q86XW9 330 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.86□□□□□ -1.472e-6■□□□□ 9
SSR3-204ENST00000467733 IP6K1Q92551 441 aa5.86□□□□□ -1.47
SSR3-204ENST00000467733 DICER1Q9UPY3 1922 aaKnown RBP5.86□□□□□ -1.47
SSR3-204ENST00000467733 KDM6AO15550 1401 aaPredicted RBP5.85□□□□□ -1.47
SSR3-204ENST00000467733 RTL1A6NKG5 1358 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 PCDH11XQ9BZA7 1347 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 PCDH11YQ9BZA8 1340 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 ANKRD33BA6NCL7 494 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 MMP10P09238 476 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 TRHRP34981 398 aaPredicted RBP5.85□□□□□ -1.47
SSR3-204ENST00000467733 EGR3Q06889 387 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 ZNF385BQ569K4 471 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 TCERG1LQ5VWI1 586 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 TMEM151BQ8IW70 566 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 SMARCC1Q92922 1105 aaPredicted RBP5.85□□□□□ -1.47
SSR3-204ENST00000467733 Q96M66 194 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 GPR62Q9BZJ7 368 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 DUSP15Q9H1R2 295 aaPredicted RBP5.85□□□□□ -1.47
SSR3-204ENST00000467733 SP110Q9HB58 689 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 RNF181Q9P0P0 153 aa5.85□□□□□ -1.47
SSR3-204ENST00000467733 TTF2Q9UNY4 1162 aaKnown RBP5.85□□□□□ -1.47
SSR3-204ENST00000467733 MYH14Q7Z406 1995 aaKnown RBP5.84□□□□□ -1.47
SSR3-204ENST00000467733 A0A0G2JLW4 131 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 TEX51A0A1B0GUA7 166 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 PGRP06401 933 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 ZGLP1P0C6A0 271 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 BMP7P18075 431 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 ERCC3P19447 782 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 PDE4BQ07343 736 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 SNX17Q15036 470 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 SMIM5Q71RC9 77 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 ZNF605Q86T29 641 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 LINC00116Q8NCU8 138 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 LTV1Q96GA3 475 aaPredicted RBP5.84□□□□□ -1.47
SSR3-204ENST00000467733 INTS4Q96HW7 963 aaKnown RBP5.84□□□□□ -1.47
SSR3-204ENST00000467733 TMEM87BQ96K49 555 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 TJP2Q9UDY2 1190 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 KCNH3Q9ULD8 1083 aa5.84□□□□□ -1.47
SSR3-204ENST00000467733 CNOT6Q9ULM6 557 aaKnown RBP5.84□□□□□ -1.47
SSR3-204ENST00000467733 YBX2Q9Y2T7 364 aaKnown RBP5.84□□□□□ -1.47
SSR3-204ENST00000467733 SMG6Q86US8 1419 aaKnown RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 A0A1W2PP64 1363 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 GFRA2O00451 464 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 LDHBP07195 334 aaKnown RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 P4HBP07237 508 aaKnown RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 DPEP1P16444 411 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 HOXC9P31274 260 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 CDK8P49336 464 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 CHRNEQ04844 493 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 EAPPQ56P03 285 aaPredicted RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 TSPYL5Q86VY4 417 aaPredicted RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 SPPL2CQ8IUH8 684 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 DNAJB8Q8NHS0 232 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 KCNC2Q96PR1 638 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 DPH2Q9BQC3 489 aaPredicted RBP5.83□□□□□ -1.48
SSR3-204ENST00000467733 ADAM30Q9UKF2 790 aa5.83□□□□□ -1.48
SSR3-204ENST00000467733 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms