RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 MCM3APO60318 1980 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 SPDYE3A6NKU9 549 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 ECM2O94769 699 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 BAATQ14032 418 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 INF2Q27J81 1249 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 ANKRD35Q8N283 1001 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 ANO3Q9BYT9 981 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 CYP39A1Q9NYL5 469 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 ZSWIM8A7E2V4 1837 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 VGLL3A8MV65 326 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 TRPA1O75762 1119 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 TBC1D8O95759 1140 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 COPB2P35606 906 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 AP3B2Q13367 1082 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 KRT25Q7Z3Z0 450 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 CCAR1Q8IX12 1150 aaKnown RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 SHCBP1Q8NEM2 672 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 SYTL5Q8TDW5 730 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 TBCKQ8TEA7 893 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 MROH8Q9H579 483 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 MAP3K20Q9NYL2 800 aaKnown RBP7.83□□□□□ -1.16
SCAF4-204ENST00000467731 ATP6V1DQ9Y5K8 247 aa7.83□□□□□ -1.16
SCAF4-204ENST00000467731 WNT7AO00755 349 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 TOB1P50616 345 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 NONOQ15233 471 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 FTOQ9C0B1 505 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 RNF186Q9NXI6 227 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 ZHX1Q9UKY1 873 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 PFASO15067 1338 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 FOSP01100 380 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 ATP2B1P20020 1258 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 UBXN2AP68543 259 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 FAM193AP78312 1265 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 CEBPZQ03701 1054 aaKnown RBP7.82□□□□□ -1.16
SCAF4-204ENST00000467731 KCTD2Q14681 263 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 RILPL1Q5EBL4 403 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 GPR142Q7Z601 462 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 SAMD3Q8N6K7 520 aa7.82□□□□□ -1.16
SCAF4-204ENST00000467731 PGK2P07205 417 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 FCER1AP12319 257 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 MAPK4P31152 587 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 CNTN2Q02246 1040 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 MCTP2Q6DN12 878 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 NEK8Q86SG6 692 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 TAAR1Q96RJ0 339 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 USP28Q96RU2 1077 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 MMP19Q99542 508 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 TFIP11Q9UBB9 837 aaKnown RBP7.81□□□□□ -1.16
SCAF4-204ENST00000467731 IVNS1ABPQ9Y6Y0 642 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 EDIL3O43854 480 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 SREBF1P36956 1147 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 LETM2Q2VYF4 491 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 CRYGNQ8WXF5 182 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 RMDN3Q96TC7 470 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 MAF1Q9H063 256 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 NOL7Q9UMY1 257 aaKnown RBP7.81□□□□□ -1.16
SCAF4-204ENST00000467731 PCDHB6Q9Y5E3 794 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 ASTN1O14525 1302 aa7.81□□□□□ -1.16
SCAF4-204ENST00000467731 CCNT1O60563 726 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 EIF2AK2P19525 551 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ADORA2AP29274 412 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 TRAPPC10P48553 1259 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ARHGAP4P98171 946 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 PXMP2Q9NR77 195 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 CNPY2Q9Y2B0 182 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 CLIC4Q9Y696 253 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ZNF236Q9UL36 1845 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 POTEB2H3BUK9 544 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 STRNO43815 780 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 BAG4O95429 457 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 CTGFP29279 349 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 KRT85P78386 507 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 PGM5Q15124 567 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 SF3A1Q15459 793 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 TTC38Q5R3I4 469 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ARHGEF16Q5VV41 709 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 FAM133AQ8N9E0 248 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 IL31RAQ8NI17 732 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ZNF396Q96N95 335 aaPredicted RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 EHMT1Q9H9B1 1298 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 GDPD2Q9HCC8 539 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 DDX49Q9Y6V7 483 aaKnown RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 LRRC37A2A6NM11 1700 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 FRMPD4Q14CM0 1322 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 RPTORQ8N122 1335 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 DNAJC25-GNG10A0A024R161 153 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 FIBPO43427 364 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 TDP2O95551 362 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 PTPREP23469 700 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 MCM7P33993 719 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 MAP2K1Q02750 393 aaPredicted RBP7.8□□□□□ -1.16
SCAF4-204ENST00000467731 GRB14Q14449 540 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 ABRAQ8N0Z2 381 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 DNAJC5GQ8N7S2 189 aa7.8□□□□□ -1.16
SCAF4-204ENST00000467731 DNERQ8NFT8 737 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms