RNA–Protein interactions for RNA: ENST00000467283.5

PTPN7-206, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-206ENST00000467283 CA3P07451 260 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 MYL3P08590 195 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 IGFBP4P22692 258 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
PTPN7-206ENST00000467283 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 COL20A1Q9P218 1284 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
PTPN7-206ENST00000467283 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
PTPN7-206ENST00000467283 RFXAPO00287 272 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 PCP11498 1178 aaKnown RBP13.12□□□□□ -0.31
PTPN7-206ENST00000467283 BMP1P13497 986 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 COL9A1P20849 921 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 RFC2P35250 354 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 PTPN11Q06124 597 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-206ENST00000467283 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 DEFB128Q7Z7B8 93 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 SESTD1Q86VW0 696 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 DHX38Q92620 1227 aaKnown RBP13.12□□□□□ -0.31
PTPN7-206ENST00000467283 KAT2BQ92831 832 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
PTPN7-206ENST00000467283 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
PTPN7-206ENST00000467283 TFF2Q03403 129 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 TAP1Q03518 808 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 PDE4DQ08499 809 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 RBL2Q08999 1139 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 SLC9A7Q96T83 725 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 UHRF1Q96T88 793 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-206ENST00000467283 MAF1Q9H063 256 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 TOMM22Q9NS69 142 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 NCOR1O75376 2440 aa13.11□□□□□ -0.31
PTPN7-206ENST00000467283 OPLAHO14841 1288 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 KPNA6O60684 536 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 LPXNO60711 386 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 MMP3P08254 477 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-206ENST00000467283 USH1GQ495M9 461 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
PTPN7-206ENST00000467283 KRT40Q6A162 431 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 GDF6Q6KF10 455 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-206ENST00000467283 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 SYTL5Q8TDW5 730 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-206ENST00000467283 NECAB3Q96P71 396 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-206ENST00000467283 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 RAD50Q92878 1312 aa13.1□□□□□ -0.31
PTPN7-206ENST00000467283 SDSP20132 328 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 KCNQ1P51787 676 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 GHRHRQ02643 423 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 LY6KQ17RY6 165 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 FAM47CQ5HY64 1035 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-206ENST00000467283 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
PTPN7-206ENST00000467283 ABCB11O95342 1321 aa13.09□□□□□ -0.31
PTPN7-206ENST00000467283 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 BAIAP3O94812 1187 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 CXCL10P02778 98 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-206ENST00000467283 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-206ENST00000467283 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
PTPN7-206ENST00000467283 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-206ENST00000467283 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 ESR2Q92731 530 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 WNT8BQ93098 351 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 EMID1Q96A84 441 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-206ENST00000467283 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 IL25Q9H293 177 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
PTPN7-206ENST00000467283 HAS3O00219 553 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-206ENST00000467283 NBNO60934 754 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 KDM4AO75164 1064 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 RGS20O76081 388 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 F2P00734 622 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 ACTN1P12814 892 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 NT5C2P49902 561 aa13.07□□□□□ -0.32
PTPN7-206ENST00000467283 WDR5P61964 334 aaKnown RBP13.07□□□□□ -0.32
PTPN7-206ENST00000467283 BFSP2Q13515 415 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms