RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 TRPC6Q9Y210 931 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 DNA2P51530 1060 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 OR2W6PQ8NHA6 318 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 IP6K1Q92551 441 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
SFXN3-204ENST00000466982 LEMD3Q9Y2U8 911 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 B4DLN1 442 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 NKRFO15226 690 aaKnown RBP eCLIP12.2□□□□□ -0.46
SFXN3-204ENST00000466982 CAPN15O75808 1086 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 SCTRP47872 440 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 GUCY2DQ02846 1103 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 RASSF8Q8NHQ8 419 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 ATP6V1G3Q96LB4 118 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 GORASP1Q9BQQ3 440 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
SFXN3-204ENST00000466982 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
SFXN3-204ENST00000466982 XIRP1Q702N8 1843 aaKnown RBP12.2□□□□□ -0.46
SFXN3-204ENST00000466982 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
SFXN3-204ENST00000466982 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 VAV2P52735 878 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 SPAG1Q07617 926 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 MPP3Q13368 585 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 BYSLQ13895 437 aaKnown RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF174Q15697 407 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 STAMBPL1Q96FJ0 436 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 MEA1Q16626 185 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 MAATS1Q7Z4T9 603 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 MIPOL1Q8TD10 442 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
SFXN3-204ENST00000466982 SPAG5Q96R06 1193 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 SALL4Q9UJQ4 1053 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 DCCP43146 1447 aa12.19□□□□□ -0.46
SFXN3-204ENST00000466982 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 IFNAR1P17181 557 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 IL15P40933 162 aaPredicted RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 GJA8P48165 433 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 BCL9LQ86UU0 1499 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 TRIM75PA6NK02 468 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 EYA2O00167 538 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 HEXIM1O94992 359 aaKnown RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 NSMCE1Q8WV22 266 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 CUL5Q93034 780 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 SEC16BQ96JE7 1060 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 ACTR5Q9H9F9 607 aaPredicted RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 CEP131Q9UPN4 1083 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 PLAAQ9Y263 795 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 L3MBTL1Q9Y468 752 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 PDLIM1O00151 329 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 PRDM1O75626 825 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 EMC10Q5UCC4 262 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 CCDC47Q96A33 483 aaKnown RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 NOD2Q9HC29 1040 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 CWC25Q9NXE8 425 aaPredicted RBP12.18□□□□□ -0.46
SFXN3-204ENST00000466982 SPATA7Q9P0W8 599 aa12.18□□□□□ -0.46
SFXN3-204ENST00000466982 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TACC1O75410 805 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 GNAT1P11488 350 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TMEM62Q0P6H9 643 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 DRP2Q13474 957 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF280DQ6N043 979 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 HIBCHQ6NVY1 386 aaPredicted RBP12.17□□□□□ -0.46
SFXN3-204ENST00000466982 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 GET4Q7L5D6 327 aaPredicted RBP12.17□□□□□ -0.46
SFXN3-204ENST00000466982 ZNF572Q7Z3I7 529 aaPredicted RBP12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TAX1BP1Q86VP1 789 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 SGMS1Q86VZ5 419 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 CCDC170Q8IYT3 715 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 TTYH3Q9C0H2 523 aa12.17□□□□□ -0.46
SFXN3-204ENST00000466982 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms