RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 COL20A1Q9P218 1284 aa29.13■■■□□ 2.25
SDF2L1-202ENST00000466935 HSD17B4P51659 736 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 TTLL4Q14679 1199 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 MFSD5Q6N075 450 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 OR6J1Q8NGC5 347 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 TAAR1Q96RJ0 339 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 SCN10AQ9Y5Y9 1956 aa29.12■■■□□ 2.25
SDF2L1-202ENST00000466935 KPNA6O60684 536 aa29.11■■■□□ 2.25
SDF2L1-202ENST00000466935 SENP2Q9HC62 589 aa29.11■■■□□ 2.25
SDF2L1-202ENST00000466935 GRIN2DO15399 1336 aa29.11■■■□□ 2.25
SDF2L1-202ENST00000466935 OPLAHO14841 1288 aa29.1■■■□□ 2.25
SDF2L1-202ENST00000466935 PPP1R11O60927 126 aaPredicted RBP29.1■■■□□ 2.25
SDF2L1-202ENST00000466935 STXBP2Q15833 593 aa29.1■■■□□ 2.25
SDF2L1-202ENST00000466935 CHST3Q7LGC8 479 aa29.1■■■□□ 2.25
SDF2L1-202ENST00000466935 PCDHA1Q9Y5I3 950 aa29.1■■■□□ 2.25
SDF2L1-202ENST00000466935 A6NJR5 290 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 DDAH1O94760 285 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 CFBP00751 764 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 TXNP10599 105 aaKnown RBP29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 MCM5P33992 734 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 PURAQ00577 322 aaKnown RBP29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 SLC35G1Q2M3R5 365 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 CCDC62Q6P9F0 684 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 CASC1Q6TDU7 716 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 TMTC2Q8N394 836 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 LY9Q9HBG7 655 aa29.09■■■□□ 2.25
SDF2L1-202ENST00000466935 PNMA6FA0A0J9YX94 578 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 SLC27A2O14975 620 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 EPHB4P54760 987 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 SMAD3P84022 425 aaKnown RBP29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 PPIGQ13427 754 aaKnown RBP eCLIP29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 NECTIN1Q15223 517 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 ARHGEF16Q5VV41 709 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 TMEM87BQ96K49 555 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 MTG1Q9BT17 334 aaPredicted RBP29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 PXMP2Q9NR77 195 aa29.08■■■□□ 2.25
SDF2L1-202ENST00000466935 CYTH3O43739 400 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 SMARCA1P28370 1054 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 ZNF654Q8IZM8 581 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 TMEM199Q8N511 208 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 PIGSQ96S52 555 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 ANO2Q9NQ90 1003 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 GPHNQ9NQX3 736 aaPredicted RBP29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 MTMR10Q9NXD2 777 aa29.07■■■□□ 2.24
SDF2L1-202ENST00000466935 PRC1O43663 620 aa29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 EIF3JO75822 258 aaKnown RBP29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 KIF5BP33176 963 aa29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 CREB3L3Q68CJ9 461 aa29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 HOMER1Q86YM7 354 aa29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 RNPC3Q96LT9 517 aaKnown RBP29.06■■■□□ 2.24
SDF2L1-202ENST00000466935 ARIH2O95376 493 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 NR3C2P08235 984 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 MYL3P08590 195 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 PSMC6P62333 389 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 Q7L0L9 218 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 CTCFLQ8NI51 663 aaPredicted RBP29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 LZTS2Q9BRK4 669 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 SPZ1Q9BXG8 430 aa29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 LAMA2P24043 3122 aaKnown RBP29.05■■■□□ 2.24
SDF2L1-202ENST00000466935 GH1P01241 217 aa29.04■■■□□ 2.24
SDF2L1-202ENST00000466935 EIF2AK2P19525 551 aaKnown RBP29.04■■■□□ 2.24
SDF2L1-202ENST00000466935 LIFRP42702 1097 aa29.04■■■□□ 2.24
SDF2L1-202ENST00000466935 RNF20Q5VTR2 975 aa29.04■■■□□ 2.24
SDF2L1-202ENST00000466935 ALDH8A1Q9H2A2 487 aaPredicted RBP29.04■■■□□ 2.24
SDF2L1-202ENST00000466935 SH2B2O14492 632 aaPredicted RBP29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 B4GALT4O60513 344 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 SUPT20HL2P0C7V6 817 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 GNAQP50148 359 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 SEPT14Q6ZU15 432 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 COPS5Q92905 334 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 PDCD2LQ9BRP1 358 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 PPP1R12CQ9BZL4 782 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 HIPK3Q9H422 1215 aa29.03■■■□□ 2.24
SDF2L1-202ENST00000466935 GCOM1H8Y6P7 765 aaPredicted RBP29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 POLR2MP0CAP2 368 aa29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 NFRKBQ6P4R8 1299 aa29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 PSRC1Q6PGN9 363 aaPredicted RBP29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 EMID1Q96A84 441 aaPredicted RBP29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 NOC4LQ9BVI4 516 aaKnown RBP29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 TRPV6Q9H1D0 765 aa29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 STXBP5LQ9Y2K9 1186 aa29.02■■■□□ 2.24
SDF2L1-202ENST00000466935 CCDC69A6NI79 296 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 CALM1P0DP23 149 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 CALM2P0DP24 149 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 CALM3P0DP25 149 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 CSF2RAP15509 400 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 PTPN11Q06124 597 aaPredicted RBP29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 ARHGAP1Q07960 439 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 ZNF697Q5TEC3 545 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 KCNV1Q6PIU1 500 aa29.01■■■□□ 2.23
SDF2L1-202ENST00000466935 CDC45O75419 566 aa29■■■□□ 2.23
SDF2L1-202ENST00000466935 CYP2C18P33260 490 aa29■■■□□ 2.23
SDF2L1-202ENST00000466935 TMEM240Q5SV17 173 aa29■■■□□ 2.23
SDF2L1-202ENST00000466935 NFXL1Q6ZNB6 911 aa29■■■□□ 2.23
SDF2L1-202ENST00000466935 VSIG10LQ86VR7 867 aa29■■■□□ 2.23
SDF2L1-202ENST00000466935 BUD13Q9BRD0 619 aaKnown RBP eCLIP29■■■□□ 2.235e-9■□□□□ 8.2
SDF2L1-202ENST00000466935 DDX41Q9UJV9 622 aaKnown RBP29■■■□□ 2.23
SDF2L1-202ENST00000466935 MYH7BA7E2Y1 1941 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 TMEM265A0A087WTH1 108 aa28.99■■■□□ 2.23
SDF2L1-202ENST00000466935 HOXA13P31271 388 aaPredicted RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms