RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 BLIDQ8IZY5 108 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 EFCC1Q9HA90 598 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 DISC1Q9NRI5 854 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 SLC8A2Q9UPR5 921 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
HPS4-209ENST00000466781 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 ABCB5Q2M3G0 1257 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 KRBA2Q6ZNG9 492 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 FAM178BQ8IXR5 827 aa9.52□□□□□ -0.89
HPS4-209ENST00000466781 GPR101Q96P66 508 aaPredicted RBP9.52□□□□□ -0.89
HPS4-209ENST00000466781 PUS3Q9BZE2 481 aaKnown RBP9.52□□□□□ -0.89
HPS4-209ENST00000466781 RNF40O75150 1001 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 RASSF2P50749 326 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 PPP2R5AQ15172 486 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 CDKL2Q92772 493 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 TYW1Q9NV66 732 aaKnown RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 RNF181Q9P0P0 153 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 PCDHA12Q9UN75 941 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 CASP2P42575 452 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 NLRP10Q86W26 655 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 RFX6Q8HWS3 928 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 RNF10Q8N5U6 811 aaKnown RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 C2orf69Q8N8R5 385 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 SLC17A8Q8NDX2 589 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 TTC1Q99614 292 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 SLF1Q9BQI6 1058 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 DSCC1Q9BVC3 393 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 KDM2BQ8NHM5 1336 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 ARHGAP42A6NI28 874 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 RGS16O15492 202 aaPredicted RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 ARHGAP6O43182 974 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 R3HDM1Q15032 1099 aaKnown RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 RNF8O76064 485 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 CCND2P30279 289 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 ADORA1P30542 326 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 COG7P83436 770 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 KAZNQ674X7 775 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 CLEC4GQ6UXB4 293 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 BZW2Q9Y6E2 419 aaKnown RBP9.51□□□□□ -0.89
HPS4-209ENST00000466781 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
HPS4-209ENST00000466781 ZNF233A6NK53 670 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 H7C0C1 242 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ATP5JP18859 108 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ANXA13P27216 316 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ATP5OP48047 213 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ARPP19P56211 112 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 IQCB1Q15051 598 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 MMEL1Q495T6 779 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
HPS4-209ENST00000466781 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 OGFRQ9NZT2 677 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 CPSF3Q9UKF6 684 aaKnown RBP9.5□□□□□ -0.89
HPS4-209ENST00000466781 ARHGEF37A1IGU5 675 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 E7EWF7 191 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ATF2P15336 505 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 BFSP1Q12934 665 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 RAPH1Q70E73 1250 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 LRGUKQ96M69 825 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 NFE2L3Q9Y4A8 694 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 SPATA31A1Q5TZJ5 1347 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 STK25O00506 426 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 MYL7Q01449 175 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 MORC3Q14149 939 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 DBN1Q16643 649 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 Q3C1V9 767 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 NEK8Q86SG6 692 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 GANCQ8TET4 914 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.5□□□□□ -0.89
HPS4-209ENST00000466781 PCDHB4Q9Y5E5 795 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 INPP5BP32019 993 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 MTX1Q13505 466 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 PNOCQ13519 176 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 GALNT17Q6IS24 598 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.5□□□□□ -0.89
HPS4-209ENST00000466781 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 ATP6V1E1P36543 226 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 IL1RL1Q01638 556 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 PDE1CQ14123 709 aaPredicted RBP9.5□□□□□ -0.89
HPS4-209ENST00000466781 KRT33BQ14525 404 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 AOC3Q16853 763 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 KRT71Q3SY84 523 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 HS1BP3Q53T59 392 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 MAP7D3Q8IWC1 876 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 FAM71BQ8TC56 605 aa9.5□□□□□ -0.89
HPS4-209ENST00000466781 STAMQ92783 540 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms