RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 EPC2Q52LR7 807 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 SP7Q8TDD2 431 aaPredicted RBP17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 TRERF1Q96PN7 1200 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 SYNPO2Q9UMS6 1093 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 DCHS1Q96JQ0 3298 aa17.57■□□□□ 0.4
HMGXB4-206ENST00000466438 RBM47A0AV96 593 aaKnown RBP17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 MBTPS2O43462 519 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 RASA1P20936 1047 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 AACSQ86V21 672 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 TRMT2AQ8IZ69 625 aaKnown RBP17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 ATOH1Q92858 354 aaPredicted RBP17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 CTAGE1Q96RT6 745 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 LCTP09848 1927 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 MYH4Q9Y623 1939 aa17.56■□□□□ 0.4
HMGXB4-206ENST00000466438 A6NJR5 290 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 GOLIM4O00461 696 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 ALAS1P13196 640 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 GPM6BQ13491 265 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 GMCL1P1Q8NEA9 526 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 MKL1Q969V6 931 aa17.55■□□□□ 0.4
HMGXB4-206ENST00000466438 PLXNA3P51805 1871 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 STXBP3O00186 592 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 NKRFO15226 690 aaKnown RBP eCLIP17.54■□□□□ 0.48e-7■□□□□ 8.8
HMGXB4-206ENST00000466438 BMP3P12645 472 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 TRIM27P14373 513 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 STAT2P52630 851 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 SMAD4Q13485 552 aaKnown RBP17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 CLUL1Q15846 466 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 DHX38Q92620 1227 aaKnown RBP17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
HMGXB4-206ENST00000466438 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 CKBP12277 381 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 ADD2P35612 726 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 ZXDAP98168 799 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 FAM160B2Q86V87 743 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 PURBQ96QR8 312 aaKnown RBP17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 DNAJC2Q99543 621 aaKnown RBP17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
HMGXB4-206ENST00000466438 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 AMHP03971 560 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 ALDH5A1P51649 535 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 VCPP55072 806 aaKnown RBP17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 DLX2Q07687 328 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 SLFN13Q68D06 897 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 NSMFQ6X4W1 530 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 ASCL5Q7RTU5 278 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 CHURC1Q8WUH1 139 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.4
HMGXB4-206ENST00000466438 COL4A6Q14031 1691 aa17.52■□□□□ 0.39
HMGXB4-206ENST00000466438 NEFLP07196 543 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 MICAL3Q7RTP6 2002 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 FBXO11Q86XK2 927 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 TMEM192Q8IY95 271 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 MTMR4Q9NYA4 1195 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
HMGXB4-206ENST00000466438 TTLL1O95922 423 aa17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 ID4P47928 161 aa17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 SIGLEC14Q08ET2 396 aa17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 STAG1Q8WVM7 1258 aa17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
HMGXB4-206ENST00000466438 FAM186AA6NE01 2351 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 PRR23AA6NEV1 266 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 H0Y858 1186 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 TBX10O75333 385 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 LGR5O75473 907 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 AVPR2P30518 371 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 NUBP1P53384 320 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 HYAL1Q12794 435 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 COPS5Q92905 334 aa17.49■□□□□ 0.39
HMGXB4-206ENST00000466438 YME1L1Q96TA2 773 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms