RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
CSMD2-207ENST00000465819 KPNA6O60684 536 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 KCNJ6P48051 423 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
CSMD2-207ENST00000465819 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 LMCD1Q9NZU5 365 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 SIP14410 1827 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 LCHNA4D1U4 455 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 NMT2O60551 498 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
CSMD2-207ENST00000465819 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
CSMD2-207ENST00000465819 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 GDPD5Q8WTR4 605 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
CSMD2-207ENST00000465819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSMD2-207ENST00000465819 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 A6NJR5 290 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 CALML3P27482 149 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 SLC16A2P36021 539 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 PDE4DQ08499 809 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 PTGISQ16647 500 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
CSMD2-207ENST00000465819 CCDC155Q8N6L0 562 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 CAGE1Q8TC20 777 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 SCFD2Q8WU76 684 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 COPS5Q92905 334 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
CSMD2-207ENST00000465819 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
CSMD2-207ENST00000465819 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 DEFB103AP81534 67 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 UBE2ZQ9H832 354 aaPredicted RBP13.13□□□□□ -0.31
CSMD2-207ENST00000465819 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
CSMD2-207ENST00000465819 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
CSMD2-207ENST00000465819 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
CSMD2-207ENST00000465819 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
CSMD2-207ENST00000465819 SELPP16109 830 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 MX1P20591 662 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 EDNRBP24530 442 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 NOVP48745 357 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 GPNMBQ14956 572 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 CNKSR3Q6P9H4 555 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
CSMD2-207ENST00000465819 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 EXOC6Q8TAG9 804 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
CSMD2-207ENST00000465819 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
CSMD2-207ENST00000465819 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
CSMD2-207ENST00000465819 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
CSMD2-207ENST00000465819 ARIH2O95376 493 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 GJB5O95377 273 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
CSMD2-207ENST00000465819 ERVK-21P61565 698 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
CSMD2-207ENST00000465819 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 GDF6Q6KF10 455 aaPredicted RBP13.11□□□□□ -0.31
CSMD2-207ENST00000465819 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 GJD3Q8N144 294 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 RAD9AQ99638 391 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
CSMD2-207ENST00000465819 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 B4DLN1 442 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 NBNO60934 754 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 CXCL10P02778 98 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 MMP3P08254 477 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 IL9P15248 144 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 KCNA5P22460 613 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
CSMD2-207ENST00000465819 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
CSMD2-207ENST00000465819 RBL2Q08999 1139 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
CSMD2-207ENST00000465819 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
CSMD2-207ENST00000465819 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms