RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 MYO9BQ13459 2157 aa16.77■□□□□ 0.27
PCCB-206ENST00000465423 SYNGAP1Q96PV0 1343 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 ATP2A1O14983 1001 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 PQBP1O60828 265 aaKnown RBP16.76■□□□□ 0.27
PCCB-206ENST00000465423 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
PCCB-206ENST00000465423 FPGSQ05932 587 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 BECN1Q14457 450 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 SYDE2Q5VT97 1194 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 TTBK2Q6IQ55 1244 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 TEX13BQ9BXU2 312 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
PCCB-206ENST00000465423 TMEM39AQ9NV64 488 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
PCCB-206ENST00000465423 MUC3AQ02505 3323 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 SYNRGQ9UMZ2 1314 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 FOSL2P15408 326 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 IFNAR1P17181 557 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 CST5P28325 142 aaPredicted RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 CDK7P50613 346 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 NTRK3Q16288 839 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 KCNA10Q16322 511 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 NECAB1Q8N987 351 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
PCCB-206ENST00000465423 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 TBX21Q9UL17 535 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 PRR12Q9ULL5 1215 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 MCM3APO60318 1980 aa16.75■□□□□ 0.27
PCCB-206ENST00000465423 ELP1O95163 1332 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 DUSP11O75319 330 aaKnown RBP16.74■□□□□ 0.27
PCCB-206ENST00000465423 TIMP1P01033 207 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 SLC16A2P36021 539 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 FUT2Q10981 343 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 CUL4AQ13619 759 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
PCCB-206ENST00000465423 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 ADGRF4Q8IZF3 695 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
PCCB-206ENST00000465423 STARD7Q9NQZ5 370 aa16.74■□□□□ 0.27
PCCB-206ENST00000465423 CNTNAP5Q8WYK1 1306 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 CYTH3O43739 400 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 DNAJB2P25686 324 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 RASIP1Q5U651 963 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
PCCB-206ENST00000465423 DDX11Q96FC9 970 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 FGD4Q96M96 766 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
PCCB-206ENST00000465423 JMJD4Q9H9V9 463 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 PNMA2Q9UL42 364 aa16.73■□□□□ 0.27
PCCB-206ENST00000465423 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
PCCB-206ENST00000465423 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
PCCB-206ENST00000465423 MYADML2A6NDP7 307 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 ADCY6O43306 1168 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 ZBED4O75132 1171 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 NKX3-2P78367 333 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 AKAP17AQ02040 695 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 TRAF1Q13077 416 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.271e-7■■■■□ 20.2
PCCB-206ENST00000465423 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 CPVLQ9H3G5 476 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 SLC38A10Q9HBR0 1119 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
PCCB-206ENST00000465423 SEC63Q9UGP8 760 aaKnown RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
PCCB-206ENST00000465423 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 ZBTB5O15062 677 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 OAZ1P54368 228 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 GJA9P57773 515 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 HMGN5P82970 282 aaKnown RBP16.71■□□□□ 0.27
PCCB-206ENST00000465423 CDC37Q16543 378 aaPredicted RBP16.71■□□□□ 0.27
PCCB-206ENST00000465423 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 NSUN7Q8NE18 718 aaKnown RBP16.71■□□□□ 0.27
PCCB-206ENST00000465423 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 SYMPKQ92797 1274 aaKnown RBP16.71■□□□□ 0.27
PCCB-206ENST00000465423 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.27
PCCB-206ENST00000465423 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms