RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ZNF827Q17R98 1081 aa7.38□□□□□ -1.23
UBR4-209ENST00000465036 CCDC81Q6ZN84 652 aa7.38□□□□□ -1.23
UBR4-209ENST00000465036 ADAT2Q7Z6V5 191 aaKnown RBP7.38□□□□□ -1.23
UBR4-209ENST00000465036 ZNF761Q86XN6 746 aaPredicted RBP7.38□□□□□ -1.23
UBR4-209ENST00000465036 KLHL6Q8WZ60 621 aa7.38□□□□□ -1.23
UBR4-209ENST00000465036 NOX5Q96PH1 765 aa7.38□□□□□ -1.23
UBR4-209ENST00000465036 RBM15Q96T37 977 aaKnown RBP eCLIP7.38□□□□□ -1.23
UBR4-209ENST00000465036 SCAMP3O14828 347 aaKnown RBP7.37□□□□□ -1.23
UBR4-209ENST00000465036 NPHS1O60500 1241 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
UBR4-209ENST00000465036 MMP19Q99542 508 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 GULP1Q9UBP9 304 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 EFR3BQ9Y2G0 817 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 DUSP10Q9Y6W6 482 aa7.37□□□□□ -1.23
UBR4-209ENST00000465036 C7orf72A4D263 438 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 CNR2P34972 360 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 CASP7P55210 303 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 DPY19L1Q2PZI1 675 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 CPNE8Q86YQ8 564 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 PLEKHO2Q8TD55 490 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 COPS5Q92905 334 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 FGD4Q96M96 766 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 GPR20Q99678 358 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 BCAS3Q9H6U6 928 aa7.36□□□□□ -1.23
UBR4-209ENST00000465036 ANKRD34BA5PLL1 514 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 CYP2C8P10632 490 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 DCP2Q8IU60 420 aaKnown RBP7.35□□□□□ -1.23
UBR4-209ENST00000465036 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 USP33Q8TEY7 942 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 ZBTB8AQ96BR9 441 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 TMPRSS5Q9H3S3 457 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 PCDHB10Q9UN67 800 aa7.35□□□□□ -1.23
UBR4-209ENST00000465036 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 INSRRP14616 1297 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 RPL13P26373 211 aaKnown RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 MIB1Q86YT6 1006 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 CRACR2BQ8N4Y2 399 aaPredicted RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 ADAMTS17Q8TE56 1095 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
UBR4-209ENST00000465036 GPRASP2Q96D09 838 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 C1QTNF3Q9BXJ4 246 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
UBR4-209ENST00000465036 C1QTNF3-AMACRE9PGA6 284 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 NTRK1P04629 796 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 C8BP07358 591 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 GJA8P48165 433 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 ADAM17P78536 824 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 KIAA2012Q0VF49 1180 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 FAM26FQ5R3K3 315 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 POMZP3Q6PJE2 187 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 SHDQ96IW2 340 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 SAMD11Q96NU1 681 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 GORASP1Q9BQQ3 440 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 C11orf84Q9BUA3 381 aaPredicted RBP7.33□□□□□ -1.24
UBR4-209ENST00000465036 SUGT1Q9Y2Z0 365 aa7.33□□□□□ -1.24
UBR4-209ENST00000465036 RECKO95980 971 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 THBS2P35442 1172 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 SLC6A11P48066 632 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 ETV3LQ6ZN32 361 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 KYQ8NBH2 561 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 AP5M1Q9H0R1 490 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 SMPD4Q9NXE4 827 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 AKT3Q9Y243 479 aa7.32□□□□□ -1.24
UBR4-209ENST00000465036 PLATP00750 562 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 FUCA1P04066 466 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 NAT2P11245 290 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 PUM1Q14671 1186 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR4-209ENST00000465036 TTLL6Q8N841 843 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 SEC14L1Q92503 715 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 DPF3Q92784 378 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 NGRNQ9NPE2 291 aaKnown RBP7.31□□□□□ -1.24
UBR4-209ENST00000465036 CYP26B1Q9NR63 512 aa7.31□□□□□ -1.24
UBR4-209ENST00000465036 PLS3P13797 630 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 TMCO4Q5TGY1 634 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 KIAA1211LQ6NV74 962 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 VHLLQ6RSH7 139 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 LGI4Q8N135 537 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 BVESQ8NE79 360 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 APBA2Q99767 749 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 CLEC1BQ9P126 229 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 APEX2Q9UBZ4 518 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 SIT1Q9Y3P8 196 aa7.3□□□□□ -1.24
UBR4-209ENST00000465036 SGSM2O43147 1006 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 SCRN1Q12765 414 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 SMAD4Q13485 552 aaKnown RBP7.29□□□□□ -1.24
UBR4-209ENST00000465036 RGL3Q3MIN7 710 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 TBC1D10BQ4KMP7 808 aaPredicted RBP7.29□□□□□ -1.24
UBR4-209ENST00000465036 CPZQ66K79 652 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 MBLAC2Q68D91 279 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 IQCEQ6IPM2 695 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 ZC3H18Q86VM9 953 aaKnown RBP7.29□□□□□ -1.24
UBR4-209ENST00000465036 Q8N1Y9 231 aa7.29□□□□□ -1.24
UBR4-209ENST00000465036 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms