RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 VAMP1P23763 118 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 SARSP49591 514 aaKnown RBP5.16□□□□□ -1.58
GARNL3-213ENST00000464616 SCRN1Q12765 414 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 RTP5Q14D33 572 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 ZNF827Q17R98 1081 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 C9orf131Q5VYM1 1079 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 NPM2Q86SE8 214 aaKnown RBP5.16□□□□□ -1.58
GARNL3-213ENST00000464616 SAPCD2Q86UD0 394 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 ZC3H18Q86VM9 953 aaKnown RBP5.16□□□□□ -1.58
GARNL3-213ENST00000464616 CARFQ8N187 725 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 BVESQ8NE79 360 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 RASGRP4Q8TDF6 673 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 DDX1Q92499 740 aaKnown RBP5.16□□□□□ -1.58
GARNL3-213ENST00000464616 GPR20Q99678 358 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 MCMBPQ9BTE3 642 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 CCSER2Q9H7U1 834 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 PCDH18Q9HCL0 1135 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 CLEC1BQ9P126 229 aa5.16□□□□□ -1.58
GARNL3-213ENST00000464616 C7orf72A4D263 438 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 MYO1BO43795 1136 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 CACNB2Q08289 660 aaPredicted RBP5.15□□□□□ -1.59
GARNL3-213ENST00000464616 NCAPHQ15003 741 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 FERMT3Q86UX7 667 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 FAM124AQ86V42 546 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 VPS37DQ86XT2 251 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 MRRFQ96E11 262 aaKnown RBP5.15□□□□□ -1.59
GARNL3-213ENST00000464616 SEC16BQ96JE7 1060 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 STRIP2Q9ULQ0 834 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 PLA2G2DQ9UNK4 145 aa5.15□□□□□ -1.59
GARNL3-213ENST00000464616 SH3D21A4FU49 640 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 PLS3P13797 630 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 FBLN1P23142 703 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 CNR2P34972 360 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 ZNF143P52747 638 aaPredicted RBP5.14□□□□□ -1.59
GARNL3-213ENST00000464616 CASP7P55210 303 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 SMAD4Q13485 552 aaKnown RBP5.14□□□□□ -1.59
GARNL3-213ENST00000464616 IQCEQ6IPM2 695 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 CD300LDQ6UXZ3 194 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 CPA5Q8WXQ8 436 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 GPRC5CQ9NQ84 441 aa5.14□□□□□ -1.59
GARNL3-213ENST00000464616 C22orf46C9J442 243 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 PRICKLE3O43900 615 aaPredicted RBP5.13□□□□□ -1.59
GARNL3-213ENST00000464616 SSBP05455 408 aaKnown RBP eCLIP5.13□□□□□ -1.59
GARNL3-213ENST00000464616 GJA8P48165 433 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 KIAA2012Q0VF49 1180 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 SV2CQ496J9 727 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 ZFYVE27Q5T4F4 411 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 KLHL6Q8WZ60 621 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 SHDQ96IW2 340 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 CHAMP1Q96JM3 812 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 MMP19Q99542 508 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 MTA3Q9BTC8 594 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 COA3Q9Y2R0 106 aaPredicted RBP5.13□□□□□ -1.59
GARNL3-213ENST00000464616 EMC9Q9Y3B6 208 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 SIT1Q9Y3P8 196 aa5.13□□□□□ -1.59
GARNL3-213ENST00000464616 KCNJ6P48051 423 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 GTF2A2P52657 109 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 RPL11P62913 178 aaKnown RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 HTRA3P83110 453 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 HDLBPQ00341 1268 aaKnown RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 ZXDCQ2QGD7 858 aaPredicted RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 METTL16Q86W50 562 aaKnown RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 TEX2Q8IWB9 1127 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 SEC14L1Q92503 715 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 TRMT2BQ96GJ1 504 aaKnown RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 CAPN10Q9HC96 672 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 NGRNQ9NPE2 291 aaKnown RBP5.12□□□□□ -1.59
GARNL3-213ENST00000464616 CYP26B1Q9NR63 512 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
GARNL3-213ENST00000464616 PPP1R11O60927 126 aaPredicted RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 THBDP07204 575 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 SNRPB2P08579 225 aaKnown RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 GNL2Q13823 731 aaKnown RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 MROH9Q5TGP6 573 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 LARP1BQ659C4 914 aaKnown RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 GTF2IRD2BQ6EKJ0 949 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 BORAQ6PGQ7 559 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 CEP68Q76N32 757 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 MILR1Q7Z6M3 343 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 GTF2IRD2Q86UP8 949 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 TTLL6Q8N841 843 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 DIO2Q92813 273 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 NOX5Q96PH1 765 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 TGIF2Q9GZN2 237 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 FBLN5Q9UBX5 448 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 CNOT11Q9UKZ1 510 aaKnown RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 R3HCC1Q9Y3T6 440 aaKnown RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 TIMM13Q9Y5L4 95 aaPredicted RBP5.11□□□□□ -1.59
GARNL3-213ENST00000464616 ZNF536O15090 1300 aa5.11□□□□□ -1.59
GARNL3-213ENST00000464616 MEFVO15553 781 aaPredicted RBP5.1□□□□□ -1.59
GARNL3-213ENST00000464616 DDAH1O94760 285 aa5.1□□□□□ -1.59
GARNL3-213ENST00000464616 INSRRP14616 1297 aa5.1□□□□□ -1.59
GARNL3-213ENST00000464616 ECI1P42126 302 aa5.1□□□□□ -1.59
GARNL3-213ENST00000464616 NKX3-2P78367 333 aa5.1□□□□□ -1.59
GARNL3-213ENST00000464616 CHRNA2Q15822 529 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms