RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
PTCD3-205ENST00000464541 PIF1Q9H611 641 aa8.94□□□□□ -0.98
PTCD3-205ENST00000464541 RWDD3Q9Y3V2 267 aa8.94□□□□□ -0.98
PTCD3-205ENST00000464541 H7BY64 318 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-205ENST00000464541 DBHP09172 617 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 TXKP42681 527 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 NTRK3Q16288 839 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 FOXB2Q5VYV0 432 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 NOP9Q86U38 636 aaKnown RBP8.93□□□□□ -0.98
PTCD3-205ENST00000464541 RIOX2Q8IUF8 465 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 KISS1RQ969F8 398 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-205ENST00000464541 EXOC2Q96KP1 924 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 PHF20Q9BVI0 1012 aa8.93□□□□□ -0.98
PTCD3-205ENST00000464541 MRPS23Q9Y3D9 190 aaKnown RBP8.93□□□□□ -0.98
PTCD3-205ENST00000464541 PPP1R11O60927 126 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-205ENST00000464541 TACR1P25103 407 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 MAPKAPK2P49137 400 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 GABREP78334 506 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 LSAMPQ13449 338 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 RAB3GAP1Q15042 981 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 MROH9Q5TGP6 573 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 BHLHE22Q8NFJ8 381 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-205ENST00000464541 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTCD3-205ENST00000464541 PLEKHO2Q8TD55 490 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 USP33Q8TEY7 942 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 FAM84AQ96KN4 292 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 MARCH2Q9P0N8 246 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 KLHL14Q9P2G3 628 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 NUDT5Q9UKK9 219 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 PTCH2Q9Y6C5 1203 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 X6R8D5 127 aa8.92□□□□□ -0.98
PTCD3-205ENST00000464541 AQP7O14520 342 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 SEMA7AO75326 666 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 FUCA1P04066 466 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 NAT1P18440 290 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 GPR85P60893 370 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 WWC2Q6AWC2 1192 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 OGFOD2Q6N063 350 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 ZNF605Q86T29 641 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 TMEM169Q96HH4 297 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 PCDHA2Q9Y5H9 948 aa8.91□□□□□ -0.98
PTCD3-205ENST00000464541 LCP1P13796 627 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 BCL6P41182 706 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 MESP2Q0VG99 397 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 KIZQ2M2Z5 673 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 RPTNQ6XPR3 784 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 DCP2Q8IU60 420 aaKnown RBP8.9□□□□□ -0.98
PTCD3-205ENST00000464541 IFNL3Q8IZI9 196 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 PEX11GQ96HA9 241 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 PPP1R16BQ96T49 567 aa8.9□□□□□ -0.98
PTCD3-205ENST00000464541 TEX51A0A1B0GUA7 166 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 NUDT19A8MXV4 375 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 C22orf46C9J442 243 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 C6orf222P0C671 652 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-205ENST00000464541 SLC6A11P48066 632 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 SLC9A5Q14940 896 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 PLEKHN1Q494U1 663 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-205ENST00000464541 ZC3H14Q6PJT7 736 aaKnown RBP8.89□□□□□ -0.99
PTCD3-205ENST00000464541 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 CEP68Q76N32 757 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 NLRP10Q86W26 655 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 TEX2Q8IWB9 1127 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 TRMT2BQ96GJ1 504 aaKnown RBP8.89□□□□□ -0.99
PTCD3-205ENST00000464541 FBLN5Q9UBX5 448 aa8.89□□□□□ -0.99
PTCD3-205ENST00000464541 COA3Q9Y2R0 106 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-205ENST00000464541 EFCAB14O75071 495 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 SDHBP21912 280 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 SYNPOQ8N3V7 929 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 SLC38A3Q99624 504 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 MRPL4Q9BYD3 311 aaKnown RBP8.88□□□□□ -0.99
PTCD3-205ENST00000464541 MCOLN1Q9GZU1 580 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 TMEM260Q9NX78 707 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
PTCD3-205ENST00000464541 BLACEA4D250 179 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-205ENST00000464541 ZBTB7AO95365 584 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 VIPR1P32241 457 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 SRSF3P84103 164 aaKnown RBP8.87□□□□□ -0.99
PTCD3-205ENST00000464541 CHRNA2Q15822 529 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 TRIM61Q5EBN2 209 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 KCNT2Q6UVM3 1135 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 TSPAN17Q96FV3 270 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 EPB41L1Q9H4G0 881 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 SIRT5Q9NXA8 310 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 CLDND1Q9NY35 253 aa8.87□□□□□ -0.99
PTCD3-205ENST00000464541 DBR1Q9UK59 544 aaKnown RBP8.87□□□□□ -0.99
PTCD3-205ENST00000464541 MYOCOSA0A1B0GUC4 107 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 MSCO60682 206 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 NTRK1P04629 796 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 GLDCP23378 1020 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 FPR2P25090 351 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 SQSTM1Q13501 440 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 RNPC3Q96LT9 517 aaKnown RBP8.86□□□□□ -0.99
PTCD3-205ENST00000464541 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms