RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DHX58Q96C10 678 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 PRIMPOLQ96LW4 560 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 IMPACTQ9P2X3 320 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
COL5A1-205ENST00000464187 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 GSDMDP57764 484 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L24Q0WX57 530 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 MORC3Q14149 939 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 TMC6Q7Z403 805 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 MYRIPQ8NFW9 859 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 SPATA20Q8TB22 786 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
COL5A1-205ENST00000464187 OTOFQ9HC10 1997 aa16.39■□□□□ 0.22
COL5A1-205ENST00000464187 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 MEIS2O14770 477 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 OPLAHO14841 1288 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 ZNF536O15090 1300 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 ICAM1P05362 532 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 MCM7P33993 719 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 SH3RF1Q7Z6J0 888 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
COL5A1-205ENST00000464187 IL17AQ16552 155 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 VWA5AO00534 786 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 CXCL11O14625 94 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 SKILP12757 684 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 PPIL2Q13356 520 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 COG2Q14746 738 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 LETM2Q2VYF4 491 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 ATG4CQ96DT6 458 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 FANCLQ9NW38 375 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 CCPG1Q9ULG6 757 aa16.38■□□□□ 0.21
COL5A1-205ENST00000464187 MRPL11Q9Y3B7 192 aaKnown RBP16.38■□□□□ 0.21
COL5A1-205ENST00000464187 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-205ENST00000464187 FDX1P10109 184 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 DSG3P32926 999 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 ARMCX5Q6P1M9 558 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-205ENST00000464187 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 WNK4Q96J92 1243 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
COL5A1-205ENST00000464187 DACH1Q9UI36 760 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 KCNH4Q9UQ05 1017 aa16.37■□□□□ 0.21
COL5A1-205ENST00000464187 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-205ENST00000464187 ABCB11O95342 1321 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 UNCXA6NJT0 531 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 CCNT1O60563 726 aaKnown RBP16.36■□□□□ 0.21
COL5A1-205ENST00000464187 ZBED4O75132 1171 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
COL5A1-205ENST00000464187 AFMP43652 599 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 UBASH3AP57075 661 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 FKBP1BP68106 108 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 E2F4Q16254 413 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 C4orf32Q8N8J7 132 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 SLC10A4Q96EP9 437 aa16.36■□□□□ 0.21
COL5A1-205ENST00000464187 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-205ENST00000464187 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-205ENST00000464187 PIK3CDO00329 1044 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 CFBP00751 764 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 SERPINC1P01008 464 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 CASP1P29466 404 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 GADL1Q6ZQY3 521 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 MED15Q96RN5 788 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 HOXC10Q9NYD6 342 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 ADAMTS5Q9UNA0 930 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 USP27XA6NNY8 438 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 EDIL3O43854 480 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 DPYDQ12882 1025 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 ARL6IP4Q66PJ3 421 aaKnown RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 MCTP2Q6DN12 878 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms