RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 FBLN1P23142 703 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 ZNF200P98182 395 aaPredicted RBP9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 KRTAP19-4Q3LI73 84 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 SLC35F1Q5T1Q4 408 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 CIAPIN1Q6FI81 312 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 NETO2Q8NC67 525 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 DIO2Q92813 273 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 KCTD3Q9Y597 815 aa9.68□□□□□ -0.86
CCDC144A-211ENST00000463809 NUAK1O60285 661 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 GTF2F1P35269 517 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 RBM10P98175 930 aaKnown RBP9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 KCNAB2Q13303 367 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 WWC2Q6AWC2 1192 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 USP33Q8TEY7 942 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 EPB41L4AQ9HCS5 686 aaPredicted RBP9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 MARCH2Q9P0N8 246 aa9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 DBR1Q9UK59 544 aaKnown RBP9.67□□□□□ -0.86
CCDC144A-211ENST00000463809 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 PI3P19957 117 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 SPOCD1Q6ZMY3 1216 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 TMEFF1Q8IYR6 380 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 RCBTB1Q8NDN9 531 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 ARMC5Q96C12 935 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 IRF2BPLQ9H1B7 796 aa9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 TIMM13Q9Y5L4 95 aaPredicted RBP9.66□□□□□ -0.86
CCDC144A-211ENST00000463809 IQCA1LA6NCM1 817 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 NTRK1P04629 796 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 IGFBP6P24592 240 aaPredicted RBP9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 LTBRP36941 435 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 MAP4K2Q12851 820 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 TSPAN17Q96FV3 270 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 IER2Q9BTL4 223 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 ARHGEF4Q9NR80 690 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 BTG4Q9NY30 223 aa9.65□□□□□ -0.86
CCDC144A-211ENST00000463809 DLX3O60479 287 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 BUB1BO60566 1050 aaPredicted RBP9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 ZSCAN22P10073 491 aaPredicted RBP9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 LCP1P13796 627 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 RPL11P62913 178 aaKnown RBP9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 RBL2Q08999 1139 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 ZNF385BQ569K4 471 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 SIAH1Q8IUQ4 282 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 Q8N1Y9 231 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 KCTD13Q8WZ19 329 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 ZNF669Q96BR6 464 aaPredicted RBP9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 PEX11GQ96HA9 241 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 HIRIP3Q9BW71 556 aaPredicted RBP9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 FBXL7Q9UJT9 491 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 NUDT5Q9UKK9 219 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 NPFFR2Q9Y5X5 522 aa9.64□□□□□ -0.87
CCDC144A-211ENST00000463809 C22orf46C9J442 243 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 RFXAPO00287 272 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 PDPK1O15530 556 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 BCL6P41182 706 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 NLRP10Q86W26 655 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 CCDC113Q9H0I3 377 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 SIT1Q9Y3P8 196 aa9.63□□□□□ -0.87
CCDC144A-211ENST00000463809 FPR2P25090 351 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 GTF2A2P52657 109 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 RASGRF1Q13972 1273 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 SLC9A5Q14940 896 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 TARBP2Q15633 366 aaKnown RBP9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 SPATC1Q76KD6 591 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 FAM129CQ86XR2 697 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 LRRC47Q8N1G4 583 aaKnown RBP9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 DACT3Q96B18 629 aaPredicted RBP9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 BCAS3Q9H6U6 928 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 SIRPGQ9P1W8 387 aa9.62□□□□□ -0.87
CCDC144A-211ENST00000463809 MYO1BO43795 1136 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 ASGR2P07307 311 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 FGFR1P11362 822 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 PFKLP17858 780 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 SERINC3Q13530 473 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 CEP68Q76N32 757 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 ALG3Q92685 438 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 OSBP2Q969R2 916 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 RNF38Q9H0F5 515 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 PCDHA2Q9Y5H9 948 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 X6R8D5 127 aa9.61□□□□□ -0.87
CCDC144A-211ENST00000463809 PRODHO43272 600 aa9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 ATF2P15336 505 aa9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 CNKSR3Q6P9H4 555 aa9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 RIOX2Q8IUF8 465 aa9.6□□□□□ -0.87
CCDC144A-211ENST00000463809 CCDC85CA6NKD9 419 aa9.59□□□□□ -0.87
CCDC144A-211ENST00000463809 PABPC1P11940 636 aaKnown RBP9.59□□□□□ -0.87
CCDC144A-211ENST00000463809 NCAM1P13591 858 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms