RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 TBX21Q9UL17 535 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 MYH6P13533 1939 aa13.86□□□□□ -0.19
RTCB-202ENST00000463455 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
RTCB-202ENST00000463455 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
RTCB-202ENST00000463455 CPT1AP50416 773 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 WTAPQ15007 396 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 USH1GQ495M9 461 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 BRDTQ58F21 947 aaPredicted RBP13.85□□□□□ -0.19
RTCB-202ENST00000463455 FAM109BQ6ICB4 259 aaPredicted RBP13.85□□□□□ -0.19
RTCB-202ENST00000463455 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 SH3RF1Q7Z6J0 888 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 PDGFCQ9NRA1 345 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
RTCB-202ENST00000463455 ZBTB5O15062 677 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 DYNC1LI2O43237 492 aaPredicted RBP13.84□□□□□ -0.19
RTCB-202ENST00000463455 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
RTCB-202ENST00000463455 TIMP1P01033 207 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 FPGSQ05932 587 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 GRM4Q14833 912 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 PPP2R5BQ15173 497 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 FAM126BQ8IXS8 530 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
RTCB-202ENST00000463455 VTI1AQ96AJ9 217 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
RTCB-202ENST00000463455 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
RTCB-202ENST00000463455 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
RTCB-202ENST00000463455 KPNA6O60684 536 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 CD4P01730 458 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
RTCB-202ENST00000463455 BEX3Q00994 111 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 TROAPQ12815 778 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 TTLL4Q14679 1199 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 MFSD5Q6N075 450 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 CXCL17Q6UXB2 119 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 MB21D2Q8IYB1 491 aaPredicted RBP13.83□□□□□ -0.2
RTCB-202ENST00000463455 TMTC2Q8N394 836 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
RTCB-202ENST00000463455 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
RTCB-202ENST00000463455 LSG1Q9H089 658 aaKnown RBP13.83□□□□□ -0.2
RTCB-202ENST00000463455 ITGB8P26012 769 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 SMARCA1P28370 1054 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 HSD17B4P51659 736 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
RTCB-202ENST00000463455 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTCB-202ENST00000463455 ITGA7Q13683 1181 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 IGDCC4Q8TDY8 1250 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
RTCB-202ENST00000463455 A6NJR5 290 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 DDAH1O94760 285 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 KIF5BP33176 963 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 MCM5P33992 734 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 ANTXR2P58335 489 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 PURAQ00577 322 aaKnown RBP13.81□□□□□ -0.2
RTCB-202ENST00000463455 SHHQ15465 462 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 STXBP2Q15833 593 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 DEFB123Q8N688 67 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 OR6J1Q8NGC5 347 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
RTCB-202ENST00000463455 SCN10AQ9Y5Y9 1956 aa13.81□□□□□ -0.2
RTCB-202ENST00000463455 TMEM265A0A087WTH1 108 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 SUPT20HL2P0C7V6 817 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 TXNP10599 105 aaKnown RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 LIFRP42702 1097 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 GNAQP50148 359 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 C9orf50Q5SZB4 431 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 CTCFLQ8NI51 663 aaPredicted RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
RTCB-202ENST00000463455 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
RTCB-202ENST00000463455 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms