RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RAI14Q9P0K7 980 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ATXN2Q99700 1313 aaKnown RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 SHTN1A0MZ66 631 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 HIBADHP31937 336 aaKnown RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 GGCXP38435 758 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 PDE4BQ07343 736 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 NEDD9Q14511 834 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 CCSAPQ6IQ19 270 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 FOXP4Q8IVH2 680 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 BCAS4Q8TDM0 211 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 MIEF2Q96C03 454 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 LAMA4Q16363 1823 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 GOLGB1Q14789 3259 aaKnown RBP9.69□□□□□ -0.86
SHQ1-203ENST00000463369 MROH7-TTC4A0A0A0MT08 1334 aa9.69□□□□□ -0.86
SHQ1-203ENST00000463369 FAM237AA0A1B0GTK4 181 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 AGPSO00116 658 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 FOSP01100 380 aaPredicted RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 BMP6P22004 513 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 USP14P54578 494 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 SLC39A14Q15043 492 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 HSP90AA4PQ58FG1 418 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 LRCH2Q5VUJ6 765 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 CPLX2Q6PUV4 134 aaKnown RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 EGFL6Q8IUX8 553 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 RTFDC1Q9BY42 306 aaPredicted RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 RSPH9Q9H1X1 276 aaPredicted RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 ZHX3Q9H4I2 956 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 PAG1Q9NWQ8 432 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 MCM8Q9UJA3 840 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 MYO6Q9UM54 1294 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 CAPN7Q9Y6W3 813 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 MAST2Q6P0Q8 1798 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 CHUKO15111 745 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 EIF3HO15372 352 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 FSBPO95073 299 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 CDC27P30260 824 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 ELF1P32519 619 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 ZAP70P43403 619 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 AMPD2Q01433 879 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 RASGRF1Q13972 1273 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 MCMDC2Q4G0Z9 681 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 SOGA3Q5TF21 947 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 SPATA5Q8NB90 893 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 DDX12PQ92771 950 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 ZKSCAN4Q969J2 545 aaPredicted RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 EDC3Q96F86 508 aaKnown RBP9.68□□□□□ -0.86
SHQ1-203ENST00000463369 C8orf76Q96K31 380 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 CAPS2Q9BXY5 557 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 MYO1AQ9UBC5 1043 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 DCTN4Q9UJW0 460 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 NFE2L3Q9Y4A8 694 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 PCDHA5Q9Y5H7 936 aa9.68□□□□□ -0.86
SHQ1-203ENST00000463369 PDS5AQ29RF7 1337 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 GOLIM4O00461 696 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 MARCKSP29966 332 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 MAN1A1P33908 653 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 AKAP17AQ02040 695 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 ECM1Q16610 540 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 C10orf62Q5T681 223 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 SHC4Q6S5L8 630 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 PI16Q6UXB8 463 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 CCDC129Q6ZRS4 1044 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 ZNF804AQ7Z570 1209 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 KBTBD3Q8NAB2 608 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 GPR101Q96P66 508 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 APBA2Q99767 749 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 CRACR2AQ9BSW2 395 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 DENND2AQ9ULE3 1009 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 RFX7Q2KHR2 1363 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 GRIN2DO15399 1336 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 A0A1B0GTH6 734 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 TARSL2A2RTX5 802 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 MYO1FO00160 1098 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 PIK3CDO00329 1044 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 TIMM44O43615 452 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 PPP6R2O75170 966 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 IL1R1P14778 569 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 RDXP35241 583 aaKnown RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 TTF1Q15361 905 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 PREPLQ4J6C6 727 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 NCAPH2Q6IBW4 605 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 PPFIBP1Q86W92 1011 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 ELOA2Q8IYF1 753 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-203ENST00000463369 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 EYA3Q99504 573 aa9.67□□□□□ -0.86
SHQ1-203ENST00000463369 SH3GL2Q99962 352 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms