RNA–Protein interactions for RNA: ENST00000463238.1

FAM53A-203, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-203ENST00000463238 CLEC4DQ8WXI8 215 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 VWCEQ96DN2 955 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 TTC14Q96N46 770 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 MAF1Q9H063 256 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 RAPGEFL1Q9UHV5 662 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 GBF1Q92538 1859 aa17.58■□□□□ 0.4
FAM53A-203ENST00000463238 LCTP09848 1927 aa17.57■□□□□ 0.4
FAM53A-203ENST00000463238 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
FAM53A-203ENST00000463238 FGAP02671 866 aa17.57■□□□□ 0.4
FAM53A-203ENST00000463238 CA3P07451 260 aa17.57■□□□□ 0.4
FAM53A-203ENST00000463238 POU3F3P20264 500 aaPredicted RBP17.57■□□□□ 0.4
FAM53A-203ENST00000463238 SKIV2LQ15477 1246 aaKnown RBP17.57■□□□□ 0.4
FAM53A-203ENST00000463238 MCMDC2Q4G0Z9 681 aa17.57■□□□□ 0.4
FAM53A-203ENST00000463238 FTOQ9C0B1 505 aaKnown RBP eCLIP17.57■□□□□ 0.4
FAM53A-203ENST00000463238 BAIAP3O94812 1187 aa17.56■□□□□ 0.4
FAM53A-203ENST00000463238 IQCF3P0C7M6 154 aa17.56■□□□□ 0.4
FAM53A-203ENST00000463238 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
FAM53A-203ENST00000463238 NT5C2P49902 561 aa17.56■□□□□ 0.4
FAM53A-203ENST00000463238 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
FAM53A-203ENST00000463238 GPATCH4Q5T3I0 446 aaKnown RBP17.56■□□□□ 0.4
FAM53A-203ENST00000463238 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
FAM53A-203ENST00000463238 XIRP2A4UGR9 3374 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 MFSD6Q6ZSS7 791 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 RNF41Q9H4P4 317 aaPredicted RBP17.55■□□□□ 0.4
FAM53A-203ENST00000463238 COG5Q9UP83 839 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 MTCH2Q9Y6C9 303 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
FAM53A-203ENST00000463238 SNHG28P0DPA3 235 aa17.54■□□□□ 0.4
FAM53A-203ENST00000463238 HSPD1P10809 573 aaKnown RBP17.54■□□□□ 0.4
FAM53A-203ENST00000463238 BMP1P13497 986 aa17.54■□□□□ 0.4
FAM53A-203ENST00000463238 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
FAM53A-203ENST00000463238 KCNJ6P48051 423 aa17.54■□□□□ 0.4
FAM53A-203ENST00000463238 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
FAM53A-203ENST00000463238 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
FAM53A-203ENST00000463238 C1QTNF1Q9BXJ1 281 aa17.54■□□□□ 0.4
FAM53A-203ENST00000463238 REV3LO60673 3130 aa17.53■□□□□ 0.4
FAM53A-203ENST00000463238 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
FAM53A-203ENST00000463238 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
FAM53A-203ENST00000463238 AFAP1L1Q8TED9 768 aa17.53■□□□□ 0.4
FAM53A-203ENST00000463238 ESR2Q92731 530 aa17.53■□□□□ 0.4
FAM53A-203ENST00000463238 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
FAM53A-203ENST00000463238 A0A0D9SFI3 127 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 PDE1AP54750 535 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 HAND2P61296 217 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 TFF2Q03403 129 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 TAP1Q03518 808 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 PTGISQ16647 500 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 USH1GQ495M9 461 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 DGKHQ86XP1 1220 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 ARNTL2Q8WYA1 636 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 COPS5Q92905 334 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
FAM53A-203ENST00000463238 ABCB11O95342 1321 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 CCDC171Q6TFL3 1326 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 TLL1O43897 1013 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 GH1P01241 217 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
FAM53A-203ENST00000463238 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 MCF2L2Q86YR7 1114 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
FAM53A-203ENST00000463238 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
FAM53A-203ENST00000463238 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 RFXAPO00287 272 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 MMP3P08254 477 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
FAM53A-203ENST00000463238 STXBP2Q15833 593 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 CCDC62Q6P9F0 684 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 AFG1LQ8WV93 481 aa17.5■□□□□ 0.39
FAM53A-203ENST00000463238 SCN5AQ14524 2016 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 ZNF213O14771 459 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 ARIH2O95376 493 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 SELPP16109 830 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 KCNQ1P51787 676 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
FAM53A-203ENST00000463238 CDC37Q16543 378 aaPredicted RBP17.49■□□□□ 0.39
FAM53A-203ENST00000463238 DGKDQ16760 1214 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 SEPT14Q6ZU15 432 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
FAM53A-203ENST00000463238 HLA-CQ95604 372 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
FAM53A-203ENST00000463238 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 KATNAL1Q9BW62 490 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 HCN4Q9Y3Q4 1203 aa17.49■□□□□ 0.39
FAM53A-203ENST00000463238 PRRC2BQ5JSZ5 2229 aaKnown RBP17.49■□□□□ 0.39
FAM53A-203ENST00000463238 EPOPA6NHQ4 379 aa17.48■□□□□ 0.39
FAM53A-203ENST00000463238 EFCAB14O75071 495 aa17.48■□□□□ 0.39
FAM53A-203ENST00000463238 WDR5P61964 334 aaKnown RBP17.48■□□□□ 0.39
FAM53A-203ENST00000463238 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
FAM53A-203ENST00000463238 RBL2Q08999 1139 aa17.48■□□□□ 0.39
FAM53A-203ENST00000463238 HDAC1Q13547 482 aaPredicted RBP17.48■□□□□ 0.39
FAM53A-203ENST00000463238 ASPRV1Q53RT3 343 aa17.48■□□□□ 0.39
FAM53A-203ENST00000463238 CNKSR3Q6P9H4 555 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms