RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 KCNAB2Q13303 367 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 PCBP2Q15366 365 aaKnown RBP eCLIP7.44□□□□□ -1.22
COPS3-205ENST00000463097 LONRF3Q496Y0 759 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 MINDY4Q4G0A6 757 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 FBXO41Q8TF61 875 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 DIO2Q92813 273 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 CEP41Q9BYV8 373 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 CLEC1BQ9P126 229 aa7.44□□□□□ -1.22
COPS3-205ENST00000463097 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 CBX7O95931 251 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 PF4V1P10720 104 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 RECQLP46063 649 aaPredicted RBP7.43□□□□□ -1.22
COPS3-205ENST00000463097 PURAQ00577 322 aaKnown RBP7.43□□□□□ -1.22
COPS3-205ENST00000463097 CDK5R2Q13319 367 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 KIZQ2M2Z5 673 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 FAM47CQ5HY64 1035 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 SFRP5Q5T4F7 317 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 TMED8Q6PL24 325 aaPredicted RBP7.43□□□□□ -1.22
COPS3-205ENST00000463097 SEZ6L2Q6UXD5 910 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 IL17RAQ96F46 866 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 GIT1Q9Y2X7 761 aa7.43□□□□□ -1.22
COPS3-205ENST00000463097 SHISA3A0PJX4 238 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 CCDC66A2RUB6 948 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 LCE2BO14633 110 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 TERTO14746 1132 aaKnown RBP7.42□□□□□ -1.22
COPS3-205ENST00000463097 WNT9AO14904 365 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 GSTA4O15217 222 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 CFBP00751 764 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 TRIM27P14373 513 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 KIR3DL1P43629 444 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 DNM2P50570 870 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 CLEC16AQ2KHT3 1053 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 RCSD1Q6JBY9 416 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 DAGLBQ8NCG7 672 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 RCBTB1Q8NDN9 531 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 C1orf162Q8NEQ5 155 aaPredicted RBP7.42□□□□□ -1.22
COPS3-205ENST00000463097 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 IRF7Q92985 503 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 FBXW5Q969U6 566 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 SCYL1Q96KG9 808 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 DUSP23Q9BVJ7 150 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 SLC12A9Q9BXP2 914 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 HDAC8Q9BY41 377 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 C1GALT1Q9NS00 363 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 WASHC2AQ641Q2 1341 aa7.42□□□□□ -1.22
COPS3-205ENST00000463097 SOD2P04179 222 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 RBP3P10745 1247 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 CYP2C19P33261 490 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 BMP8BP34820 402 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 ST5P78524 1137 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 GTF2H3Q13889 308 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 DDB1Q16531 1140 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 ARHGAP44Q17R89 818 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 C4orf46Q504U0 113 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 SGO2Q562F6 1265 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 EEF1DP3Q658K8 133 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 PGM2L1Q6PCE3 622 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 LINC00114Q6XXX2 140 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 Q6ZNB5 142 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 C16orf59Q7L2K0 433 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 PNMA8AQ86V59 439 aaPredicted RBP7.41□□□□□ -1.22
COPS3-205ENST00000463097 ZNF655Q8N720 491 aaPredicted RBP7.41□□□□□ -1.22
COPS3-205ENST00000463097 C2orf69Q8N8R5 385 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 USP33Q8TEY7 942 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 TIFAQ96CG3 184 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 CLIP3Q96DZ5 547 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 ARPC5LQ9BPX5 153 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 IPPKQ9H8X2 491 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 PRDM5Q9NQX1 630 aaPredicted RBP7.41□□□□□ -1.22
COPS3-205ENST00000463097 GPATCH2Q9NW75 528 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 OXSMQ9NWU1 459 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 H2AFY2Q9P0M6 372 aaPredicted RBP7.41□□□□□ -1.22
COPS3-205ENST00000463097 ZBTB21Q9ULJ3 1066 aa7.41□□□□□ -1.22
COPS3-205ENST00000463097 FAM47E-STBD1D6RA91 191 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 IFRD1O00458 451 aaPredicted RBP7.4□□□□□ -1.22
COPS3-205ENST00000463097 LEFTY1O75610 366 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 VAV1P15498 845 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 GLB1P16278 677 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 YBX3P16989 372 aaKnown RBP eCLIP7.4□□□□□ -1.223e-8■□□□□ 8.7
COPS3-205ENST00000463097 KRT85P78386 507 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 BROXQ5VW32 411 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 CREB3L3Q68CJ9 461 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 Q6ZS46 218 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 EFHBQ8N7U6 833 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 GIMAP7Q8NHV1 300 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
COPS3-205ENST00000463097 PANK1Q8TE04 598 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms