RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	NAPA	P54920	295 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	ANAPC15	P60006	121 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	DNER	Q8NFT8	737 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	SPC25	Q9HBM1	224 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	VTA1	Q9NP79	307 aa		11.08	□□□□□ -0.64
PSMD4-208	ENST00000462970	DNAH12	Q6ZR08	3092 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	CAPN2	P17655	700 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	PTGS1	P23219	599 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	NEK4	P51957	841 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	RCAN1	P53805	252 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	ATN1	P54259	1190 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	LRRC41	Q15345	812 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	UBE2S	Q16763	222 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	WWC2	Q6AWC2	1192 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	USP17L6P	Q6QN14	398 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	SEPT14	Q6ZU15	432 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	RNF180	Q86T96	592 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	PHKB	Q93100	1093 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	VTI1A	Q96AJ9	217 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	ZFP91	Q96JP5	570 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	SLC26A6	Q9BXS9	759 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	AP5M1	Q9H0R1	490 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	PSTPIP2	Q9H939	334 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	UPF2	Q9HAU5	1272 aa	Known RBP	11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	PXMP2	Q9NR77	195 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	BRCA2	P51587	3418 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	SYNRG	Q9UMZ2	1314 aa		11.07	□□□□□ -0.64
PSMD4-208	ENST00000462970	DNM1L	O00429	736 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	DYNC1LI2	O43237	492 aa	Predicted RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	ADCY6	O43306	1168 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	EVI5	O60447	810 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	DUSP11	O75319	330 aa	Known RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	NR3C2	P08235	984 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	SMPD1	P17405	629 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	ADCY7	P51828	1080 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	AK2	P54819	239 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	IRX5	P78411	483 aa	Predicted RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	BEX3	Q00994	111 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	FUT2	Q10981	343 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	PPP2R5B	Q15173	497 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	STXBP2	Q15833	593 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	GNAS	Q5JWF2	1037 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	IQSEC1	Q6DN90	963 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	TAPT1	Q6NXT6	567 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	CPLX2	Q6PUV4	134 aa	Known RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	TLK2	Q86UE8	772 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	C7orf61	Q8IZ16	206 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	IWS1	Q96ST2	819 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	AGXT2	Q9BYV1	514 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	WDR11	Q9BZH6	1224 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	KATNBL1	Q9H079	304 aa		11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	SLK	Q9H2G2	1235 aa	Predicted RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	MKI67	P46013	3256 aa	Known RBP	11.06	□□□□□ -0.64
PSMD4-208	ENST00000462970	LOC102724159	A0A0B4J2E5	919 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	MYADML2	A6NDP7	307 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	SORBS3	O60504	671 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	DTNB	O60941	627 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	TXN	P10599	105 aa	Known RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	SCG2	P13521	617 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	CCND2	P30279	289 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	MNX1	P50219	401 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	SSRP1	Q08945	709 aa	Known RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	PWP2	Q15269	919 aa	Known RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	ANKRD1	Q15327	319 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	TMEM63B	Q5T3F8	832 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	UBE2Q1	Q7Z7E8	422 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	TRIM22	Q8IYM9	498 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	FBXL16	Q8N461	479 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	IL31RA	Q8NI17	732 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	MORC4	Q8TE76	937 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	SCFD2	Q8WU76	684 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	ZNF274	Q96GC6	653 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	C22orf23	Q9BZE7	217 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	MAF1	Q9H063	256 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	DOCK5	Q9H7D0	1870 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	MAP3K20	Q9NYL2	800 aa	Known RBP	11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	ATP11B	Q9Y2G3	1177 aa		11.05	□□□□□ -0.64
PSMD4-208	ENST00000462970	SMCO2	A6NFE2	343 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	SPDYE3	A6NKU9	549 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	STXBP3	O00186	592 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	EDNRB	P24530	442 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	ACLY	P53396	1101 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	CHMP4BP1	P59074	171 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	TTLL4	Q14679	1199 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	PGM5	Q15124	567 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	KCNA10	Q16322	511 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	PFKFB3	Q16875	520 aa	Predicted RBP	11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	HABP4	Q5JVS0	413 aa	Known RBP	11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	SAMD3	Q8N6K7	520 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	OR6J1	Q8NGC5	347 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	COPS5	Q92905	334 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	PDCD2L	Q9BRP1	358 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	RBM27	Q9P2N5	1060 aa	Known RBP	11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	TPCN1	Q9ULQ1	816 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	NR2E3	Q9Y5X4	410 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	MRVI1	Q9Y6F6	885 aa		11.04	□□□□□ -0.64
PSMD4-208	ENST00000462970	NID2	Q14112	1375 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms