RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 TAF1CQ15572 869 aaPredicted RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 IMMTQ16891 758 aaKnown RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 CASC1Q6TDU7 716 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 LBX2Q6XYB7 198 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 GADL1Q6ZQY3 521 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 MYPNQ86TC9 1320 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 TBC1D10CQ8IV04 446 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 ZNF444Q8N0Y2 327 aaPredicted RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 GMCL1P1Q8NEA9 526 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 GTF3C2Q8WUA4 911 aaPredicted RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 GTPBP3Q969Y2 492 aaKnown RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 GMCL1Q96IK5 515 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 ALPK3Q96L96 1907 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 CNNM2Q9H8M5 875 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 MTMR4Q9NYA4 1195 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 TMOD4Q9NZQ9 345 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 TFIP11Q9UBB9 837 aaKnown RBP6.12□□□□□ -1.43
PDCD4-204ENST00000462577 MYH15Q9Y2K3 1946 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 TACC3Q9Y6A5 838 aa6.12□□□□□ -1.43
PDCD4-204ENST00000462577 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 DOCK5Q9H7D0 1870 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 NEDD4P46934 1319 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 A6NJY4 79 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 MPHOSPH10O00566 681 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 WDR46O15213 610 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TTLL1O95922 423 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 THBS1P07996 1170 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 CYP21A2P08686 494 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TSPY3P0CV98 308 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TSPY8P0CW00 308 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 BCRP11274 1271 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 EEF2P13639 858 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 MSX1P28360 303 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 PLA2G4AP47712 749 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 GCLCP48506 637 aaPredicted RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TFAP4Q01664 338 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 GAS6Q14393 721 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 NECTIN1Q15223 517 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 CCDC178Q5BJE1 867 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TREML2Q5T2D2 321 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 C17orf99Q6UX52 265 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 MFSD6Q6ZSS7 791 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 ACER1Q8TDN7 264 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 ANKS1AQ92625 1134 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 CEP95Q96GE4 821 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 CALR3Q96L12 384 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 TTC14Q96N46 770 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 FEZ1Q99689 392 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 MTA3Q9BTC8 594 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 KRT23Q9C075 422 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 NUCKS1Q9H1E3 243 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 VCPKMTQ9H867 229 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 IL17RBQ9NRM6 502 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 MORF4L1Q9UBU8 362 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 RBM8AQ9Y5S9 174 aaKnown RBP6.11□□□□□ -1.43
PDCD4-204ENST00000462577 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
PDCD4-204ENST00000462577 WDR19Q8NEZ3 1342 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 FAM181BA6NEQ2 426 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 TSPY2A6NKD2 308 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 CDK2AP1O14519 115 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 PLA2G6O60733 806 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 EIF5BO60841 1220 aaKnown RBP6.1□□□□□ -1.43
PDCD4-204ENST00000462577 FKTNO75072 461 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 PRDM1O75626 825 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 VCAM1P19320 739 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 LBX1P52954 281 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 HAND2P61296 217 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 CLDN10P78369 228 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 DGKZQ13574 1117 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 MTFR1Q15390 333 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 CATSPERGQ6ZRH7 1159 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 DGKHQ86XP1 1220 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 TRIM50Q86XT4 487 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 CLEC10AQ8IUN9 316 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 ZNF296Q8WUU4 475 aaPredicted RBP6.1□□□□□ -1.43
PDCD4-204ENST00000462577 ESR2Q92731 530 aa6.1□□□□□ -1.43
PDCD4-204ENST00000462577 KCNB2Q92953 911 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms