RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 CRYGNQ8WXF5 182 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 RMDN3Q96TC7 470 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 MMP19Q99542 508 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 DIS3Q9Y2L1 958 aaKnown RBP12.15□□□□□ -0.46
RTF1-202ENST00000462276 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 MAFGO15525 162 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 PTPREP23469 700 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 TOB1P50616 345 aaPredicted RBP12.14□□□□□ -0.47
RTF1-202ENST00000462276 SLC39A14Q15043 492 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 ARHGEF6Q15052 776 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 EARS2Q5JPH6 523 aaKnown RBP12.14□□□□□ -0.47
RTF1-202ENST00000462276 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
RTF1-202ENST00000462276 NIPA1Q7RTP0 329 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
RTF1-202ENST00000462276 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 PORCNQ9H237 461 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 CPA4Q9UI42 421 aa12.14□□□□□ -0.47
RTF1-202ENST00000462276 ELP1O95163 1332 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 PTPRFP10586 1907 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 TBX3O15119 743 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 PPP6R2O75170 966 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
RTF1-202ENST00000462276 PRPHP41219 470 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 GRB14Q14449 540 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 KIF22Q14807 665 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 SF3A1Q15459 793 aaKnown RBP12.13□□□□□ -0.47
RTF1-202ENST00000462276 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 MSL3Q8N5Y2 521 aaKnown RBP12.13□□□□□ -0.47
RTF1-202ENST00000462276 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 MBOAT7Q96N66 472 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 PXMP2Q9NR77 195 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 RNF186Q9NXI6 227 aa12.13□□□□□ -0.47
RTF1-202ENST00000462276 RLFQ13129 1914 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 ASB14A6NK59 587 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 DDX11L8A8MPP1 907 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 ADAMTS3O15072 1205 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 SPTLC2O15270 562 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 GNRH1P01148 92 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 NR3C2P08235 984 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 CCND2P30279 289 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 ZNF76P36508 570 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 FCGRTP55899 365 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 STK38Q15208 465 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 Q4G0T1 1027 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 FAM20AQ96MK3 541 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
RTF1-202ENST00000462276 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
RTF1-202ENST00000462276 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 MEIS1O00470 390 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 NEMFO60524 1076 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 PEX10O60683 326 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 TRPA1O75762 1119 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 HOXC6P09630 235 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 EDNRBP24530 442 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 HOXD10P28358 340 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 ADORA2AP29274 412 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 MCM7P33993 719 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 ATP2C1P98194 919 aaPredicted RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 SP3Q02447 781 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 PTGDRQ13258 359 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 IRF5Q13568 498 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 PGM5Q15124 567 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 PTPAQ15257 358 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 ZNF174Q15697 407 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 STXBP2Q15833 593 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 ZNF792Q3KQV3 632 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms