RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 TCHHQ07283 1943 aa11.99□□□□□ -0.49
SCNM1-204ENST00000461862 MYH6P13533 1939 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 COL2A1P02458 1487 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 ASTN2O75129 1339 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 IGHA1P01876 353 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 CALM1P0DP23 149 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 CALM2P0DP24 149 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 CALM3P0DP25 149 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 COL8A1P27658 744 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 HIRAP54198 1017 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 PSMA6P60900 246 aaKnown RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 SUZ12Q15022 739 aaKnown RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 C16orf86Q6ZW13 317 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 TTC6Q86TZ1 520 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 MICU3Q86XE3 530 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 BTBD6Q96KE9 485 aa11.98□□□□□ -0.49
SCNM1-204ENST00000461862 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 AVENQ9NQS1 362 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-204ENST00000461862 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 A6NJR5 290 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 TSPY2A6NKD2 308 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 H3BQV1 296 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 WDHD1O75717 1129 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 DDAH1O94760 285 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 AMPD1P23109 780 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 ADH6P28332 368 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 DGKGP49619 791 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 FMR1Q06787 632 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 GRIN2CQ14957 1233 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 RTN1Q16799 776 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 ZNF468Q5VIY5 522 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 CATIPQ7Z7H3 387 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 ZNF654Q8IZM8 581 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 STK11IPQ8N1F8 1099 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 TRPM4Q8TD43 1214 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 ZSCAN16Q9H4T2 348 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 TCP11L1Q9NUJ3 509 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 MARK1Q9P0L2 795 aa11.97□□□□□ -0.49
SCNM1-204ENST00000461862 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 GPC6Q9Y625 555 aaPredicted RBP11.97□□□□□ -0.49
SCNM1-204ENST00000461862 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 PRDM1O75626 825 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 IFNAR1P17181 557 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 MMP14P50281 582 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 PCBP4P57723 403 aaKnown RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 CDC42EP5Q6NZY7 148 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 CDC37L1Q7L3B6 337 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 DGKHQ86XP1 1220 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 KIAA0825Q8IV33 1275 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 ZNF444Q8N0Y2 327 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 WASF1Q92558 559 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 ANKS1AQ92625 1134 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 OSBPL5Q9H0X9 879 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 RBM28Q9NW13 759 aaKnown RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 ORC3Q9UBD5 711 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 SWAP70Q9UH65 585 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 SAP30BPQ9UHR5 308 aaKnown RBP11.96□□□□□ -0.49
SCNM1-204ENST00000461862 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.49
SCNM1-204ENST00000461862 GREB1LQ9C091 1923 aaPredicted RBP11.96□□□□□ -0.5
SCNM1-204ENST00000461862 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 RASA1P20936 1047 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 PLCD1P51178 756 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 CHSY3Q70JA7 882 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 MAP3K14Q99558 947 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 IDI2Q9BXS1 227 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 EHD4Q9H223 541 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 SUV39H2Q9H5I1 410 aa11.95□□□□□ -0.5
SCNM1-204ENST00000461862 TAF1DQ9H5J8 278 aaPredicted RBP11.95□□□□□ -0.5
SCNM1-204ENST00000461862 MBD3O95983 291 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
SCNM1-204ENST00000461862 CDC27P30260 824 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 CDK8P49336 464 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 KRT85P78386 507 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 TFAP4Q01664 338 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 GABPAQ06546 454 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 RESTQ13127 1097 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 PICALMQ13492 652 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 NTRK3Q16288 839 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
SCNM1-204ENST00000461862 GPC2Q8N158 579 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms