RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 CFAP54Q96N23 3096 aa7□□□□□ -1.29
SPTA1-202ENST00000461624 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
SPTA1-202ENST00000461624 WDR64B1ANS9 1081 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 SASH1O94885 1247 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 WNT11O96014 354 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 ESRRAP11474 423 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 MAPK1P28482 360 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 LACTBP83111 547 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 SF3B3Q15393 1217 aaKnown RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 DACT2Q5SW24 774 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 OTUD7BQ6GQQ9 843 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 SND1Q7KZF4 910 aaKnown RBP eCLIP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 MCM10Q7L590 875 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 APOBEC3FQ8IUX4 373 aaKnown RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 RBCK1Q9BYM8 510 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 RRP7AQ9Y3A4 280 aaKnown RBP6.99□□□□□ -1.29
SPTA1-202ENST00000461624 SH3TC1Q8TE82 1336 aa6.99□□□□□ -1.29
SPTA1-202ENST00000461624 ADAMTS4O75173 837 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 CCL5P13501 91 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 TXKP42681 527 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 PRMT2P55345 433 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 ARHGEF6Q15052 776 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 SGO2Q562F6 1265 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 EXOSC6Q5RKV6 272 aaKnown RBP6.98□□□□□ -1.29
SPTA1-202ENST00000461624 ZSCAN29Q8IWY8 852 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-202ENST00000461624 TDHQ8IZJ6 230 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 FAM43AQ8N2R8 423 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 C12orf50Q8NA57 414 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-202ENST00000461624 U2AF1L4Q8WU68 220 aaKnown RBP6.98□□□□□ -1.29
SPTA1-202ENST00000461624 FAM122AQ96E09 287 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 MXD3Q9BW11 206 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 ZC3H12CQ9C0D7 883 aaKnown RBP6.98□□□□□ -1.29
SPTA1-202ENST00000461624 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 SPTBN4Q9H254 2564 aa6.98□□□□□ -1.29
SPTA1-202ENST00000461624 DLG5Q8TDM6 1919 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 UFL1O94874 794 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 MYL6BP14649 208 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 TAL1P17542 331 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-202ENST00000461624 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-202ENST00000461624 EIF4A1P60842 406 aaKnown RBP6.97□□□□□ -1.29
SPTA1-202ENST00000461624 DCTN1Q14203 1278 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-202ENST00000461624 PROSER3Q2NL68 480 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 METTL22Q9BUU2 404 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-202ENST00000461624 DEFB129Q9H1M3 183 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 LATS2Q9NRM7 1088 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 MIS18AQ9NYP9 233 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 SRRDQ9UH36 339 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 ADGRA2Q96PE1 1338 aa6.97□□□□□ -1.29
SPTA1-202ENST00000461624 MGAMO43451 1857 aa6.96□□□□□ -1.29
SPTA1-202ENST00000461624 TRIOO75962 3097 aa6.96□□□□□ -1.29
SPTA1-202ENST00000461624 TLR2O60603 784 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 USP2O75604 605 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-202ENST00000461624 GRK4P32298 578 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 TAF7Q15545 349 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-202ENST00000461624 HP1BP3Q5SSJ5 553 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-202ENST00000461624 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 YIPF2Q9BWQ6 316 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 NRSN2Q9GZP1 204 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 TRMT112Q9UI30 125 aaKnown RBP6.96□□□□□ -1.3
SPTA1-202ENST00000461624 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 RIPOR2Q9Y4F9 1068 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 ZNF804BA4D1E1 1349 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 AOX1Q06278 1338 aa6.96□□□□□ -1.3
SPTA1-202ENST00000461624 FAM95CA0A1B0GW59 222 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 SGPL1O95470 568 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 DLGAP3O95886 979 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 F13BP05160 661 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 PRKAR2BP31323 418 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 MMP14P50281 582 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 RPS8P62241 208 aaKnown RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 GSTM4Q03013 218 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 C17orf99Q6UX52 265 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 OPTNQ96CV9 577 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 THUMPD2Q9BTF0 503 aaKnown RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 OSBPL1AQ9BXW6 950 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 GZF1Q9H116 711 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 ZCCHC17Q9NP64 241 aaKnown RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 PAK6Q9NQU5 681 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 ZMYND8Q9ULU4 1186 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-202ENST00000461624 USP34Q70CQ2 3546 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 ARAP2Q8WZ64 1704 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 IRS2Q9Y4H2 1338 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 MED23Q9ULK4 1368 aa6.95□□□□□ -1.3
SPTA1-202ENST00000461624 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 ZDBF2Q9HCK1 2354 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 DDX60LQ5H9U9 1706 aaKnown RBP6.94□□□□□ -1.3
SPTA1-202ENST00000461624 CCL15-CCL14A0A0B4J2E2 113 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 HTATSF1O43719 755 aaKnown RBP6.94□□□□□ -1.3
SPTA1-202ENST00000461624 FOSL1P15407 271 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 USP11P51784 963 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 SOX4Q06945 474 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-202ENST00000461624 CCL15Q16663 113 aa6.94□□□□□ -1.3
SPTA1-202ENST00000461624 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms