RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
PABPC4-208ENST00000461578 ZBED2Q9BTP6 218 aa16.26■□□□□ 0.19
PABPC4-208ENST00000461578 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
PABPC4-208ENST00000461578 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
PABPC4-208ENST00000461578 BAIAP3O94812 1187 aa16.25■□□□□ 0.19
PABPC4-208ENST00000461578 WDR5P61964 334 aaKnown RBP16.25■□□□□ 0.19
PABPC4-208ENST00000461578 DEFB103AP81534 67 aa16.25■□□□□ 0.19
PABPC4-208ENST00000461578 PTGISQ16647 500 aa16.25■□□□□ 0.19
PABPC4-208ENST00000461578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
PABPC4-208ENST00000461578 PI4K2BG5E9Z4 385 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 NKRFO15226 690 aaKnown RBP eCLIP16.24■□□□□ 0.19
PABPC4-208ENST00000461578 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
PABPC4-208ENST00000461578 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
PABPC4-208ENST00000461578 SYDE2Q5VT97 1194 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
PABPC4-208ENST00000461578 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
PABPC4-208ENST00000461578 GPCPD1Q9NPB8 672 aa16.24■□□□□ 0.19
PABPC4-208ENST00000461578 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 A6NJR5 290 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 KPNA6O60684 536 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 ARIH2O95376 493 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 PTPN11Q06124 597 aaPredicted RBP16.23■□□□□ 0.19
PABPC4-208ENST00000461578 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
PABPC4-208ENST00000461578 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 CCDC155Q8N6L0 562 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
PABPC4-208ENST00000461578 UBE2ZQ9H832 354 aaPredicted RBP16.23■□□□□ 0.19
PABPC4-208ENST00000461578 LOC102724159A0A0B4J2E5 919 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
PABPC4-208ENST00000461578 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
PABPC4-208ENST00000461578 GPNMBQ14956 572 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 PWP2Q15269 919 aaKnown RBP16.22■□□□□ 0.19
PABPC4-208ENST00000461578 TCTN1Q2MV58 587 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
PABPC4-208ENST00000461578 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 UIMC1Q96RL1 719 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
PABPC4-208ENST00000461578 SUGCTQ9HAC7 445 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 TOMM22Q9NS69 142 aa16.22■□□□□ 0.19
PABPC4-208ENST00000461578 SELPP16109 830 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 KCNA5P22460 613 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 CNKSR3Q6P9H4 555 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 DHX38Q92620 1227 aaKnown RBP16.21■□□□□ 0.19
PABPC4-208ENST00000461578 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
PABPC4-208ENST00000461578 CTAGE1Q96RT6 745 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
PABPC4-208ENST00000461578 SIP14410 1827 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 LINC01553A4QN01 128 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 FOXP2O15409 715 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 NBNO60934 754 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 IL9P15248 144 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 EDNRBP24530 442 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 RRP12Q5JTH9 1297 aaKnown RBP16.2■□□□□ 0.18
PABPC4-208ENST00000461578 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 FAM178BQ8IXR5 827 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 GJD3Q8N144 294 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 RAD9AQ99638 391 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 MUC6Q6W4X9 2439 aa16.2■□□□□ 0.18
PABPC4-208ENST00000461578 PRR33A8MZF0 331 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 GJB5O95377 273 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 MMP3P08254 477 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 ERVK-21P61565 698 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 LY6KQ17RY6 165 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 LEXMQ3ZCV2 418 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 USH1GQ495M9 461 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.19■□□□□ 0.18
PABPC4-208ENST00000461578 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
PABPC4-208ENST00000461578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.18■□□□□ 0.18
PABPC4-208ENST00000461578 TOP1P11387 765 aaKnown RBP16.18■□□□□ 0.18
PABPC4-208ENST00000461578 CKBP12277 381 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 NOVP48745 357 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 PTCRAQ6ISU1 281 aaPredicted RBP16.18■□□□□ 0.18
PABPC4-208ENST00000461578 KAT2BQ92831 832 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 ALG1Q9BT22 464 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
PABPC4-208ENST00000461578 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 B4DLN1 442 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 GH1P01241 217 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 CXCL10P02778 98 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 PDHBP11177 359 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
PABPC4-208ENST00000461578 FBXO22Q8NEZ5 403 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 PI4K2BQ8TCG2 481 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
PABPC4-208ENST00000461578 C17orf80Q9BSJ5 609 aa16.17■□□□□ 0.18
PABPC4-208ENST00000461578 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms