RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 A0A0G2JLL6 359 aaPredicted RBP6.92□□□□□ -1.3
UBA3-204ENST00000461522 TBX1O43435 398 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 SUSD5O60279 629 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 PLA2G1BP04054 148 aaKnown RBP6.92□□□□□ -1.3
UBA3-204ENST00000461522 ITGAVP06756 1048 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 SLC9A5Q14940 896 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 FXNQ16595 210 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 INF2Q27J81 1249 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 MRM1Q6IN84 353 aaKnown RBP6.92□□□□□ -1.3
UBA3-204ENST00000461522 ZNF227Q86WZ6 799 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 MCF2L2Q86YR7 1114 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
UBA3-204ENST00000461522 FFAR3O14843 346 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 SASH1O94885 1247 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 FUCA1P04066 466 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 SCG5P05408 212 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 PMLP29590 882 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 MC3RP41968 323 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 HTRA3P83110 453 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 ARID5AQ03989 594 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 VWA3BQ502W6 1294 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 B3GNT8Q7Z7M8 397 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 SP8Q8IXZ3 490 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 FNIP1Q8TF40 1166 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 BCAS3Q9H6U6 928 aa6.91□□□□□ -1.3
UBA3-204ENST00000461522 LUC7LQ9NQ29 371 aaKnown RBP6.91□□□□□ -1.3
UBA3-204ENST00000461522 DDAH1O94760 285 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 NTRK1P04629 796 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 HOXC12P31275 282 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 SV2CQ496J9 727 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
UBA3-204ENST00000461522 IQCEQ6IPM2 695 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 CPA5Q8WXQ8 436 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 RTEL1Q9NZ71 1219 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.3
UBA3-204ENST00000461522 OTOL1A6NHN0 477 aaPredicted RBP6.89□□□□□ -1.31
UBA3-204ENST00000461522 ARNTLO00327 626 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 TESK1Q15569 626 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 CCDC103Q8IW40 242 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 GMLQ99445 158 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 PMF1-BGLAPU3KQ54 211 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 NCANO14594 1321 aa6.89□□□□□ -1.31
UBA3-204ENST00000461522 PRRG2O14669 202 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 GJB6O95452 261 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 CAPNS1P04632 268 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
UBA3-204ENST00000461522 DCP2Q8IU60 420 aaKnown RBP6.88□□□□□ -1.31
UBA3-204ENST00000461522 Q8N1Y9 231 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 FEZF2Q8TBJ5 459 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 RELTQ969Z4 430 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 CCDC140Q96MF4 163 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
UBA3-204ENST00000461522 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
UBA3-204ENST00000461522 SH3D21A4FU49 640 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 B8ZZF3 427 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 CPP00450 1065 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 SNRPB2P08579 225 aaKnown RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 GFRA1P56159 465 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 DLX2Q07687 328 aaPredicted RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 LIPIQ6XZB0 460 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 EEPD1Q7L9B9 569 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 EPN3Q9H201 632 aa6.87□□□□□ -1.31
UBA3-204ENST00000461522 TIMM13Q9Y5L4 95 aaPredicted RBP6.87□□□□□ -1.31
UBA3-204ENST00000461522 C22orf46C9J442 243 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 MEFVO15553 781 aaPredicted RBP6.86□□□□□ -1.31
UBA3-204ENST00000461522 ECI1P42126 302 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 SLC6A11P48066 632 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
UBA3-204ENST00000461522 SLURP1P55000 103 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
UBA3-204ENST00000461522 NFIXQ14938 502 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 SLC10A6Q3KNW5 377 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 NLRP10Q86W26 655 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 RIOX2Q8IUF8 465 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 SMARCC2Q8TAQ2 1214 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 HNRNPLLQ8WVV9 542 aaKnown RBP6.86□□□□□ -1.31
UBA3-204ENST00000461522 DIO2Q92813 273 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 BTG4Q9NY30 223 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 X6R8D5 127 aa6.86□□□□□ -1.31
UBA3-204ENST00000461522 SGSM2O43147 1006 aa6.85□□□□□ -1.31
UBA3-204ENST00000461522 FPR2P25090 351 aa6.85□□□□□ -1.31
UBA3-204ENST00000461522 PRSS53Q2L4Q9 553 aa6.85□□□□□ -1.31
UBA3-204ENST00000461522 MROH9Q5TGP6 573 aa6.85□□□□□ -1.31
UBA3-204ENST00000461522 DENND5AQ6IQ26 1287 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms