RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 KRT40Q6A162 431 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.24
COL5A3-202ENST00000461214 SLAIN1Q8ND83 568 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 IPO9Q96P70 1041 aaKnown RBP16.52■□□□□ 0.24
COL5A3-202ENST00000461214 PORCNQ9H237 461 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 BRMS1Q9HCU9 246 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
COL5A3-202ENST00000461214 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.23
COL5A3-202ENST00000461214 LAMA3Q16787 3333 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 SMCO2A6NFE2 343 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 STRNO43815 780 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 ADCY3O60266 1144 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 PEX10O60683 326 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
COL5A3-202ENST00000461214 BMP8BP34820 402 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 FCGRTP55899 365 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 NLRP5P59047 1200 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 LARP1BQ659C4 914 aaKnown RBP16.51■□□□□ 0.23
COL5A3-202ENST00000461214 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
COL5A3-202ENST00000461214 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
COL5A3-202ENST00000461214 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
COL5A3-202ENST00000461214 PCDHA4Q9UN74 947 aa16.51■□□□□ 0.23
COL5A3-202ENST00000461214 H3BQV1 296 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 DTNBO60941 627 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 INHAP05111 366 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 FCER1AP12319 257 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
COL5A3-202ENST00000461214 KCTD2Q14681 263 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 SAFBQ15424 915 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL5A3-202ENST00000461214 NPY5RQ15761 445 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 RNF207Q6ZRF8 634 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 SOCS4Q8WXH5 440 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 MMP19Q99542 508 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
COL5A3-202ENST00000461214 FRMPD4Q14CM0 1322 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
COL5A3-202ENST00000461214 CFBP00751 764 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 SYT1P21579 422 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 KRT2P35908 639 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
COL5A3-202ENST00000461214 GRB14Q14449 540 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 WDR78Q5VTH9 848 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 NECAB2Q7Z6G3 386 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 TDHQ8IZJ6 230 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 BLIDQ8IZY5 108 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 ALPK3Q96L96 1907 aa16.49■□□□□ 0.23
COL5A3-202ENST00000461214 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 M0R2N6 131 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 MEIS2O14770 477 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 STX6O43752 255 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 RPS6P62753 249 aaKnown RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 FAM161BQ96MY7 647 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
COL5A3-202ENST00000461214 EHMT1Q9H9B1 1298 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 PRDM6Q9NQX0 595 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
COL5A3-202ENST00000461214 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 LOXHD1Q8IVV2 1947 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-202ENST00000461214 PTPREP23469 700 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 DDIT3P35638 169 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 FLT3LGP49771 235 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 FOSBP53539 338 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 KRT25Q7Z3Z0 450 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 DNERQ8NFT8 737 aa16.47■□□□□ 0.23
COL5A3-202ENST00000461214 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-202ENST00000461214 UNC80Q8N2C7 3258 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 U2AF2P26368 475 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL5A3-202ENST00000461214 ADORA2AP29274 412 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 GUCY1B3Q02153 619 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 TNFRSF25Q93038 417 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
COL5A3-202ENST00000461214 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
COL5A3-202ENST00000461214 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
COL5A3-202ENST00000461214 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
COL5A3-202ENST00000461214 MAP2K5Q13163 448 aa16.45■□□□□ 0.22
COL5A3-202ENST00000461214 GNL2Q13823 731 aaKnown RBP16.45■□□□□ 0.22
COL5A3-202ENST00000461214 BAATQ14032 418 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms