RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 RREB1Q92766 1687 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 IL16Q14005 1332 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 NUP188Q5SRE5 1749 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 PALLDQ8WX93 1383 aa6.21□□□□□ -1.41
SF3A3-202ENST00000460925 SPDYE3A6NKU9 549 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 ERVV-2B6SEH9 535 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 CHL1O00533 1208 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 RGS13O14921 159 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 WISP1O95388 367 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 TIAF1O95411 115 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 ANXA1P04083 346 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 ADH5P11766 374 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 MCCP23508 829 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 GMPRP36959 345 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 EIF4A1P60842 406 aaKnown RBP6.21□□□□□ -1.42
SF3A3-202ENST00000460925 GNAI1P63096 354 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 SQSTM1Q13501 440 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 LONRF2Q1L5Z9 754 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 BBS9Q3SYG4 887 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF790Q6PG37 636 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 VHLLQ6RSH7 139 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 SMIM5Q71RC9 77 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 FAM13CQ8NE31 585 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 WHAMMQ8TF30 809 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 CYP4F12Q9HCS2 524 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 KLHL3Q9UH77 587 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 PRKAB1Q9Y478 270 aa6.21□□□□□ -1.42
SF3A3-202ENST00000460925 CICQ96RK0 1608 aaPredicted RBP6.21□□□□□ -1.42
SF3A3-202ENST00000460925 UBR3Q6ZT12 1888 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 C4AP0C0L4 1744 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 C4BP0C0L5 1744 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 PIK3R2O00459 728 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 RAG1P15918 1043 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF143P52747 638 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 SOX4Q06945 474 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF385CQ66K41 422 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 SPATC1Q76KD6 591 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 TRMT2AQ8IZ69 625 aaKnown RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 TMEM130Q8N3G9 435 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 SYNPOQ8N3V7 929 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 DHRS1Q96LJ7 313 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 MYH16Q9H6N6 1097 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 RGPD3A6NKT7 1758 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-202ENST00000460925 RGPD4Q7Z3J3 1758 aa6.2□□□□□ -1.42
SF3A3-202ENST00000460925 HEG1Q9ULI3 1381 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ARFGEF2Q9Y6D5 1785 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 CACNA1FO60840 1977 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 GNB5O14775 395 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ARHGEF15O94989 841 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ELNP15502 786 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 EIF2S2P20042 333 aaKnown RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 PMS1P54277 932 aaKnown RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ANAPC15P60006 121 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 SLC7A5Q01650 507 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 CALD1Q05682 793 aaKnown RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ITPK1Q13572 414 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 SLBPQ14493 270 aaKnown RBP eCLIP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 PROSER3Q2NL68 480 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 TWISTNBQ3B726 338 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ZC3H12BQ5HYM0 836 aaKnown RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 RNF187Q5TA31 235 aaPredicted RBP6.19□□□□□ -1.42
SF3A3-202ENST00000460925 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ACAD11Q709F0 780 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 DEFB132Q7Z7B7 95 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 DNAJC10Q8IXB1 793 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 TTC5Q8N0Z6 440 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 NGEFQ8N5V2 710 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 FBRSQ9HAH7 460 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 PICK1Q9NRD5 415 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 USP16Q9Y5T5 823 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF831Q5JPB2 1677 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 KDM2BQ8NHM5 1336 aa6.19□□□□□ -1.42
SF3A3-202ENST00000460925 AFDNP55196 1824 aaKnown RBP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 SUSD5O60279 629 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 BCAR3O75815 825 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 UBOX5O94941 541 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 APBA3O96018 575 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 SSRP1Q08945 709 aaKnown RBP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 TTLL4Q14679 1199 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 EZH2Q15910 746 aaKnown RBP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 NKG7Q16617 165 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 SLC10A6Q3KNW5 377 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 ANKRD34AQ69YU3 496 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 KIAA1211LQ6NV74 962 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 AMIGO3Q86WK7 504 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 LINC00116Q8NCU8 138 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 NEDD1Q8NHV4 660 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 ZNF526Q8TF50 670 aaPredicted RBP6.18□□□□□ -1.42
SF3A3-202ENST00000460925 CYB5D2Q8WUJ1 264 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 CCDC74BQ96LY2 380 aa6.18□□□□□ -1.42
SF3A3-202ENST00000460925 FMNL2Q96PY5 1086 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms