RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SOWAHBA6NEL2 793 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 PPFIA3O75145 1194 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 CD2BP2O95400 341 aaKnown RBP25.82■■□□□ 1.72
C9orf3-209ENST00000460573 HABP4Q5JVS0 413 aaKnown RBP25.82■■□□□ 1.72
C9orf3-209ENST00000460573 CCDC83Q8IWF9 413 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 NSUN7Q8NE18 718 aaKnown RBP25.82■■□□□ 1.72
C9orf3-209ENST00000460573 CCDC148Q8NFR7 591 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 PAWRQ96IZ0 340 aaKnown RBP25.82■■□□□ 1.72
C9orf3-209ENST00000460573 TMX3Q96JJ7 454 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 FGD4Q96M96 766 aa25.82■■□□□ 1.72
C9orf3-209ENST00000460573 ESYT2A0FGR8 921 aa25.81■■□□□ 1.72
C9orf3-209ENST00000460573 ANKLE1Q8NAG6 615 aa25.81■■□□□ 1.72
C9orf3-209ENST00000460573 SMARCC2Q8TAQ2 1214 aa25.81■■□□□ 1.72
C9orf3-209ENST00000460573 NSUN6Q8TEA1 469 aaKnown RBP25.81■■□□□ 1.72
C9orf3-209ENST00000460573 CRISPLD2Q9H0B8 497 aa25.81■■□□□ 1.72
C9orf3-209ENST00000460573 RIC8AQ9NPQ8 531 aa25.81■■□□□ 1.72
C9orf3-209ENST00000460573 ORC3Q9UBD5 711 aaPredicted RBP25.81■■□□□ 1.72
C9orf3-209ENST00000460573 SMCO2A6NFE2 343 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 MEIS2O14770 477 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 XBP1P17861 261 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 GNA11P29992 359 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 ALDH5A1P51649 535 aaPredicted RBP25.8■■□□□ 1.72
C9orf3-209ENST00000460573 ST3GAL1Q11201 340 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 MAP3K21Q5TCX8 1036 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 TYW1BQ6NUM6 668 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 MORC4Q8TE76 937 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 ZMYND12Q9H0C1 365 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 C6orf50Q9HD87 102 aa25.8■■□□□ 1.72
C9orf3-209ENST00000460573 HOXA13P31271 388 aaPredicted RBP25.79■■□□□ 1.72
C9orf3-209ENST00000460573 CYP2C19P33261 490 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 ADCY7P51828 1080 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 CACNB2Q08289 660 aaPredicted RBP25.79■■□□□ 1.72
C9orf3-209ENST00000460573 UBE2Q1Q7Z7E8 422 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 TAAR1Q96RJ0 339 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 IWS1Q96ST2 819 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 CNPY2Q9Y2B0 182 aa25.79■■□□□ 1.72
C9orf3-209ENST00000460573 CNGA1P29973 690 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 HMGN5P82970 282 aaKnown RBP25.78■■□□□ 1.72
C9orf3-209ENST00000460573 USP17L6PQ6QN14 398 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 ARMCX2Q7L311 632 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 BICD2Q8TD16 824 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 PURBQ96QR8 312 aaKnown RBP25.78■■□□□ 1.72
C9orf3-209ENST00000460573 RMDN3Q96TC7 470 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 COL20A1Q9P218 1284 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 ASTN1O14525 1302 aa25.78■■□□□ 1.72
C9orf3-209ENST00000460573 FDPSP14324 419 aaKnown RBP25.77■■□□□ 1.72
C9orf3-209ENST00000460573 ARHGEF16Q5VV41 709 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 MCTP2Q6DN12 878 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 CHRDL2Q6WN34 429 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 SNX21Q969T3 373 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 ABHD16BQ9H3Z7 469 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-209ENST00000460573 VPS54Q9P1Q0 977 aa25.77■■□□□ 1.72
C9orf3-209ENST00000460573 COLQQ9Y215 455 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-209ENST00000460573 SNAI1O95863 264 aaPredicted RBP25.76■■□□□ 1.71
C9orf3-209ENST00000460573 FOSP01100 380 aaPredicted RBP25.76■■□□□ 1.71
C9orf3-209ENST00000460573 EDNRBP24530 442 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 GALNT17Q6IS24 598 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 FCHSD1Q86WN1 690 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 DIS3LQ8TF46 1054 aaKnown RBP25.76■■□□□ 1.71
C9orf3-209ENST00000460573 C11orf49Q9H6J7 331 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 PXMP2Q9NR77 195 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 LCTP09848 1927 aa25.76■■□□□ 1.71
C9orf3-209ENST00000460573 JAK2O60674 1132 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 CYBAP13498 195 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 CCND3P30281 292 aaPredicted RBP25.75■■□□□ 1.71
C9orf3-209ENST00000460573 NLRP5P59047 1200 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 PDE4DQ08499 809 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 ALG1Q9BT22 464 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 EHMT1Q9H9B1 1298 aa25.75■■□□□ 1.71
C9orf3-209ENST00000460573 SPDYE3A6NKU9 549 aa25.74■■□□□ 1.71
C9orf3-209ENST00000460573 AP3B2Q13367 1082 aa25.74■■□□□ 1.71
C9orf3-209ENST00000460573 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.74■■□□□ 1.71
C9orf3-209ENST00000460573 CEP290O15078 2479 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 FRMPD4Q14CM0 1322 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 EIF2AK2P19525 551 aaKnown RBP25.73■■□□□ 1.71
C9orf3-209ENST00000460573 CLK2P49760 499 aaKnown RBP25.73■■□□□ 1.71
C9orf3-209ENST00000460573 ACVR2BQ13705 512 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 STXBP2Q15833 593 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 UBE2SQ16763 222 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 AIFM3Q96NN9 605 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 PDCD2LQ9BRP1 358 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 VTA1Q9NP79 307 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 OGDHLQ9ULD0 1010 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 KIF3AQ9Y496 699 aa25.73■■□□□ 1.71
C9orf3-209ENST00000460573 K7ELQ4 463 aaPredicted RBP25.72■■□□□ 1.71
C9orf3-209ENST00000460573 NR3C2P08235 984 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 PGM5Q15124 567 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 XRRA1Q6P2D8 792 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 REXO1Q8N1G1 1221 aaKnown RBP25.72■■□□□ 1.71
C9orf3-209ENST00000460573 DAGLBQ8NCG7 672 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 PCDHA6Q9UN73 950 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 PCDHA8Q9Y5H6 950 aa25.72■■□□□ 1.71
C9orf3-209ENST00000460573 MSCO60682 206 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 ZNF865P0CJ78 1059 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-209ENST00000460573 CUL4AQ13619 759 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 PRAMEF19Q5SWL8 479 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 C7orf61Q8IZ16 206 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 FAM184AQ8NB25 1140 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 TRPV1Q8NER1 839 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms