RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MYL3P08590 195 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 TXNP10599 105 aaKnown RBP26.53■■□□□ 1.84
PTPN4-207ENST00000460162 DNAJB2P25686 324 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 PTH1RQ03431 593 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 STAG2Q8N3U4 1231 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 IWS1Q96ST2 819 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 AMNQ9BXJ7 453 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 TRPV6Q9H1D0 765 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 COL20A1Q9P218 1284 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 TANC1Q9C0D5 1861 aa26.53■■□□□ 1.84
PTPN4-207ENST00000460162 A6NJR5 290 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 KLRF2D3W0D1 207 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 SGSM2O43147 1006 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 KPNA6O60684 536 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 GHRHRQ02643 423 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 UMODL1Q5DID0 1318 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 RALYLQ86SE5 291 aaKnown RBP26.52■■□□□ 1.84
PTPN4-207ENST00000460162 TBC1D5Q92609 795 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 MTMR8Q96EF0 704 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 TAAR1Q96RJ0 339 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 VAT1LQ9HCJ6 419 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 MAD2L2Q9UI95 211 aa26.52■■□□□ 1.84
PTPN4-207ENST00000460162 ERICH2A1L162 156 aa26.51■■□□□ 1.83
PTPN4-207ENST00000460162 ARIH2O95376 493 aa26.51■■□□□ 1.83
PTPN4-207ENST00000460162 SUPT20HL2P0C7V6 817 aa26.51■■□□□ 1.83
PTPN4-207ENST00000460162 ZNF365Q70YC5 407 aa26.51■■□□□ 1.83
PTPN4-207ENST00000460162 RMDN3Q96TC7 470 aa26.51■■□□□ 1.83
PTPN4-207ENST00000460162 MTIF3Q9H2K0 278 aaKnown RBP26.51■■□□□ 1.83
PTPN4-207ENST00000460162 UNC80Q8N2C7 3258 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 PALM3A6NDB9 673 aaPredicted RBP26.5■■□□□ 1.83
PTPN4-207ENST00000460162 ZBTB5O15062 677 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 ACRP10323 421 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 GRM4Q14833 912 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 SART3Q15020 963 aaKnown RBP26.5■■□□□ 1.83
PTPN4-207ENST00000460162 CCDC62Q6P9F0 684 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 NCOA7Q8NI08 942 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 COPS5Q92905 334 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 WNT8AQ9H1J5 351 aa26.5■■□□□ 1.83
PTPN4-207ENST00000460162 HSD17B4P51659 736 aa26.49■■□□□ 1.83
PTPN4-207ENST00000460162 STXBP2Q15833 593 aa26.49■■□□□ 1.83
PTPN4-207ENST00000460162 HERVK_113Q902F9 699 aa26.49■■□□□ 1.83
PTPN4-207ENST00000460162 MAP3K20Q9NYL2 800 aaKnown RBP26.49■■□□□ 1.83
PTPN4-207ENST00000460162 A0A0C4DFX4 3053 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 E7EWF7 191 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 OPLAHO14841 1288 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 IFIT3O14879 490 aaKnown RBP26.48■■□□□ 1.83
PTPN4-207ENST00000460162 CFBP00751 764 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 ARHGEF16Q5VV41 709 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 NFRKBQ6P4R8 1299 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 MYLIPQ8WY64 445 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 TRMT13Q9NUP7 481 aaKnown RBP26.48■■□□□ 1.83
PTPN4-207ENST00000460162 EYSQ5T1H1 3165 aa26.48■■□□□ 1.83
PTPN4-207ENST00000460162 GBF1Q92538 1859 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 PPP1R11O60927 126 aaPredicted RBP26.47■■□□□ 1.83
PTPN4-207ENST00000460162 GH1P01241 217 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 CCL23P55773 120 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 PTPN11Q06124 597 aaPredicted RBP26.47■■□□□ 1.83
PTPN4-207ENST00000460162 TRAF1Q13077 416 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 WTAPQ15007 396 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 FAM47CQ5HY64 1035 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 SEPT14Q6ZU15 432 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 SAMD3Q8N6K7 520 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 TIFAQ96CG3 184 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 PXMP2Q9NR77 195 aa26.47■■□□□ 1.83
PTPN4-207ENST00000460162 FGBP02675 491 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 FOSL2P15408 326 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 EIF2AK2P19525 551 aaKnown RBP26.46■■□□□ 1.83
PTPN4-207ENST00000460162 NBPF20Q3BBV1 942 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 STOX1Q6ZVD7 989 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 MAP4K1Q92918 833 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 PBX4Q9BYU1 374 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 RIOX1Q9H6W3 641 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 PCDHA1Q9Y5I3 950 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 TAF6LQ9Y6J9 622 aa26.46■■□□□ 1.83
PTPN4-207ENST00000460162 CUL9Q8IWT3 2517 aa26.45■■□□□ 1.83
PTPN4-207ENST00000460162 DLL1O00548 723 aa26.45■■□□□ 1.82
PTPN4-207ENST00000460162 EIF3JO75822 258 aaKnown RBP26.45■■□□□ 1.82
PTPN4-207ENST00000460162 PFKMP08237 780 aa26.45■■□□□ 1.82
PTPN4-207ENST00000460162 MMP3P08254 477 aa26.45■■□□□ 1.82
PTPN4-207ENST00000460162 ARHGAP1Q07960 439 aa26.45■■□□□ 1.82
PTPN4-207ENST00000460162 HOMER1Q86YM7 354 aa26.45■■□□□ 1.82
PTPN4-207ENST00000460162 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.45■■□□□ 1.82
PTPN4-207ENST00000460162 RPUSD2Q8IZ73 545 aaKnown RBP26.45■■□□□ 1.82
PTPN4-207ENST00000460162 MAFAQ8NHW3 353 aaPredicted RBP26.45■■□□□ 1.82
PTPN4-207ENST00000460162 NR3C2P08235 984 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 CYP2C9P11712 490 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 TROAPQ12815 778 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 LY6KQ17RY6 165 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 SLC35G1Q2M3R5 365 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 MB21D2Q8IYB1 491 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-207ENST00000460162 AFG1LQ8WV93 481 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 ZNF576Q9H609 170 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 SENP2Q9HC62 589 aa26.44■■□□□ 1.82
PTPN4-207ENST00000460162 RBM8AQ9Y5S9 174 aaKnown RBP26.44■■□□□ 1.82
PTPN4-207ENST00000460162 SCN5AQ14524 2016 aa26.43■■□□□ 1.82
PTPN4-207ENST00000460162 RAB30Q15771 203 aa26.43■■□□□ 1.82
PTPN4-207ENST00000460162 EMID1Q96A84 441 aaPredicted RBP26.43■■□□□ 1.82
PTPN4-207ENST00000460162 PIGSQ96S52 555 aa26.43■■□□□ 1.82
PTPN4-207ENST00000460162 PDCD2LQ9BRP1 358 aa26.43■■□□□ 1.82
PTPN4-207ENST00000460162 CXXC1Q9P0U4 656 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms