RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
IMP4-207ENST00000460100 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
IMP4-207ENST00000460100 GNEQ9Y223 722 aaKnown RBP16.69■□□□□ 0.26
IMP4-207ENST00000460100 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 B4DLN1 442 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 CCT2P78371 535 aaKnown RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 PFKFB3Q16875 520 aaPredicted RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 NECAB2Q7Z6G3 386 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
IMP4-207ENST00000460100 LENG1Q96BZ8 264 aaPredicted RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 MPHOSPH6Q99547 160 aaKnown RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 RNF26Q9BY78 433 aaPredicted RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 UPF3AQ9H1J1 476 aaKnown RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 NCOA5Q9HCD5 579 aaKnown RBP16.68■□□□□ 0.26
IMP4-207ENST00000460100 XPNPEP3Q9NQH7 507 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
IMP4-207ENST00000460100 STXBP3O00186 592 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 CTAGE5O15320 804 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 NR3C2P08235 984 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 SMPD1P17405 629 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 NEK4P51957 841 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 GJA9P57773 515 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 PDE4DQ08499 809 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 LRRC41Q15345 812 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 TMEM63BQ5T3F8 832 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 CCSAPQ6IQ19 270 aaPredicted RBP16.67■□□□□ 0.26
IMP4-207ENST00000460100 PPP1R18Q6NYC8 613 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 USP17L6PQ6QN14 398 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 PSTPIP2Q9H939 334 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
IMP4-207ENST00000460100 Q9Y3F1 56 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 SYNRGQ9UMZ2 1314 aa16.67■□□□□ 0.26
IMP4-207ENST00000460100 PFKFB2O60825 505 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 PGK1P00558 417 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 SCG2P13521 617 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
IMP4-207ENST00000460100 CST5P28325 142 aaPredicted RBP16.66■□□□□ 0.26
IMP4-207ENST00000460100 SCRN1Q12765 414 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 PGM5Q15124 567 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 STXBP2Q15833 593 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
IMP4-207ENST00000460100 PHKBQ93100 1093 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 C11orf49Q9H6J7 331 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 ALPK3Q96L96 1907 aa16.66■□□□□ 0.26
IMP4-207ENST00000460100 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
IMP4-207ENST00000460100 RGS20O76081 388 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 FCHSD1Q86WN1 690 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 WDR11Q9BZH6 1224 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 RIC8AQ9NPQ8 531 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
IMP4-207ENST00000460100 CEP290O15078 2479 aa16.64■□□□□ 0.26
IMP4-207ENST00000460100 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 MYADML2A6NDP7 307 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 NAPAP54920 295 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
IMP4-207ENST00000460100 ME3Q16798 604 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 RNF180Q86T96 592 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
IMP4-207ENST00000460100 TSEN34Q9BSV6 310 aaKnown RBP16.64■□□□□ 0.25
IMP4-207ENST00000460100 ARIH2O95376 493 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 PTGS1P23219 599 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 CLK2P49760 499 aaKnown RBP16.63■□□□□ 0.25
IMP4-207ENST00000460100 STK3Q13188 491 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 CUL5Q93034 780 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 HTATIP2Q9BUP3 242 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 SLC26A6Q9BXS9 759 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
IMP4-207ENST00000460100 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
IMP4-207ENST00000460100 SMCO2A6NFE2 343 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
IMP4-207ENST00000460100 LARGE1O95461 756 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
IMP4-207ENST00000460100 UBE2SQ16763 222 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 XRRA1Q6P2D8 792 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 TLK2Q86UE8 772 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
IMP4-207ENST00000460100 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
IMP4-207ENST00000460100 CPLX1O14810 134 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms