RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ARHGEF16Q5VV41 709 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 ZNF713Q8N859 430 aaPredicted RBP25.07■■□□□ 1.6
SSNA1-202ENST00000459860 MORC4Q8TE76 937 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 RMDN3Q96TC7 470 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 XPNPEP3Q9NQH7 507 aa25.07■■□□□ 1.6
SSNA1-202ENST00000459860 FAM217BQ9NTX9 383 aaPredicted RBP25.07■■□□□ 1.6
SSNA1-202ENST00000459860 CCT2P78371 535 aaKnown RBP25.06■■□□□ 1.6
SSNA1-202ENST00000459860 CCDC144BQ3MJ40 725 aa25.06■■□□□ 1.6
SSNA1-202ENST00000459860 CPLX2Q6PUV4 134 aaKnown RBP25.06■■□□□ 1.6
SSNA1-202ENST00000459860 EEPD1Q7L9B9 569 aa25.06■■□□□ 1.6
SSNA1-202ENST00000459860 FBXO16Q8IX29 292 aaPredicted RBP25.06■■□□□ 1.6
SSNA1-202ENST00000459860 ARRDC4Q8NCT1 418 aa25.06■■□□□ 1.6
SSNA1-202ENST00000459860 ALDH8A1Q9H2A2 487 aaPredicted RBP25.06■■□□□ 1.6
SSNA1-202ENST00000459860 V9GY48 417 aaPredicted RBP25.06■■□□□ 1.6
SSNA1-202ENST00000459860 ALPK3Q96L96 1907 aa25.06■■□□□ 1.6
SSNA1-202ENST00000459860 CPLX1O14810 134 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 MYCNP04198 464 aaPredicted RBP25.05■■□□□ 1.6
SSNA1-202ENST00000459860 HOXA13P31271 388 aaPredicted RBP25.05■■□□□ 1.6
SSNA1-202ENST00000459860 MAGEA10P43363 369 aaPredicted RBP25.05■■□□□ 1.6
SSNA1-202ENST00000459860 FUT2Q10981 343 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 SMARCC2Q8TAQ2 1214 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 TAAR1Q96RJ0 339 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 IWS1Q96ST2 819 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 C22orf23Q9BZE7 217 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 KATNBL1Q9H079 304 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 COL20A1Q9P218 1284 aa25.05■■□□□ 1.6
SSNA1-202ENST00000459860 KBTBD13C9JR72 458 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 EIF2AK2P19525 551 aaKnown RBP25.04■■□□□ 1.6
SSNA1-202ENST00000459860 EDNRBP24530 442 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 NEK4P51957 841 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 NAPAP54920 295 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 PPP1R18Q6NYC8 613 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 NOL8Q76FK4 1167 aaKnown RBP25.04■■□□□ 1.6
SSNA1-202ENST00000459860 GPKOWQ92917 476 aaPredicted RBP eCLIP25.04■■□□□ 1.6
SSNA1-202ENST00000459860 SPC25Q9HBM1 224 aa25.04■■□□□ 1.6
SSNA1-202ENST00000459860 DDX49Q9Y6V7 483 aaKnown RBP25.04■■□□□ 1.6
SSNA1-202ENST00000459860 DUSP11O75319 330 aaKnown RBP25.03■■□□□ 1.6
SSNA1-202ENST00000459860 AK2P54819 239 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 TNFAIP2Q03169 654 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 STK3Q13188 491 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 RNF180Q86T96 592 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 FCHSD1Q86WN1 690 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 LARP6Q9BRS8 491 aaKnown RBP25.03■■□□□ 1.6
SSNA1-202ENST00000459860 NCOA5Q9HCD5 579 aaKnown RBP25.03■■□□□ 1.6
SSNA1-202ENST00000459860 PXMP2Q9NR77 195 aa25.03■■□□□ 1.6
SSNA1-202ENST00000459860 KIAA1217Q5T5P2 1943 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 DNM1LO00429 736 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 IFNAR1P17181 557 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 STXBP2Q15833 593 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 LRRC26Q2I0M4 334 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 WWC2Q6AWC2 1192 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 IQSEC1Q6DN90 963 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 TRIM22Q8IYM9 498 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 RNF26Q9BY78 433 aaPredicted RBP25.02■■□□□ 1.6
SSNA1-202ENST00000459860 PSTPIP2Q9H939 334 aa25.02■■□□□ 1.6
SSNA1-202ENST00000459860 SCG2P13521 617 aa25.01■■□□□ 1.59
SSNA1-202ENST00000459860 ADCYAP1R1P41586 468 aa25.01■■□□□ 1.59
SSNA1-202ENST00000459860 PHKBQ93100 1093 aa25.01■■□□□ 1.59
SSNA1-202ENST00000459860 LENG1Q96BZ8 264 aaPredicted RBP25.01■■□□□ 1.59
SSNA1-202ENST00000459860 SLC26A6Q9BXS9 759 aa25.01■■□□□ 1.59
SSNA1-202ENST00000459860 SLKQ9H2G2 1235 aaPredicted RBP25.01■■□□□ 1.59
SSNA1-202ENST00000459860 PIK3CDO00329 1044 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 PRPF3O43395 683 aaKnown RBP25■■□□□ 1.59
SSNA1-202ENST00000459860 CDKL5O76039 1030 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 PFKFB3Q16875 520 aaPredicted RBP25■■□□□ 1.59
SSNA1-202ENST00000459860 LRIT3Q3SXY7 679 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 GJC2Q5T442 439 aaPredicted RBP25■■□□□ 1.59
SSNA1-202ENST00000459860 TAPT1Q6NXT6 567 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 CCDC12Q8WUD4 166 aaPredicted RBP25■■□□□ 1.59
SSNA1-202ENST00000459860 BARHL2Q9NY43 387 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 SYNRGQ9UMZ2 1314 aa25■■□□□ 1.59
SSNA1-202ENST00000459860 PGK1P00558 417 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 NR3C2P08235 984 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 RBM25P49756 843 aaKnown RBP24.99■■□□□ 1.59
SSNA1-202ENST00000459860 LRRC41Q15345 812 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 GPR153Q6NV75 609 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 USP17L6PQ6QN14 398 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 TEX2Q8IWB9 1127 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 SCFD2Q8WU76 684 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 PDCD2LQ9BRP1 358 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 GLT8D2Q9H1C3 349 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 PDGFCQ9NRA1 345 aa24.99■■□□□ 1.59
SSNA1-202ENST00000459860 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.98■■□□□ 1.59
SSNA1-202ENST00000459860 STXBP3O00186 592 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 C6orf222P0C671 652 aaPredicted RBP24.98■■□□□ 1.59
SSNA1-202ENST00000459860 MYCLP12524 364 aaPredicted RBP24.98■■□□□ 1.59
SSNA1-202ENST00000459860 CCND2P30279 289 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 ADCY7P51828 1080 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 SSRP1Q08945 709 aaKnown RBP24.98■■□□□ 1.59
SSNA1-202ENST00000459860 PGM5Q15124 567 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 NTRK3Q16288 839 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 TDHQ8IZJ6 230 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 WDR11Q9BZH6 1224 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 AP5M1Q9H0R1 490 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 EHMT1Q9H9B1 1298 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 TPCN1Q9ULQ1 816 aa24.98■■□□□ 1.59
SSNA1-202ENST00000459860 SPDYE3A6NKU9 549 aa24.97■■□□□ 1.59
SSNA1-202ENST00000459860 MEIS2O14770 477 aa24.97■■□□□ 1.59
SSNA1-202ENST00000459860 ADAMTS4O75173 837 aa24.97■■□□□ 1.59
SSNA1-202ENST00000459860 EIF3JO75822 258 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms