RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ARID5AQ03989 594 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 TEX2Q8IWB9 1127 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 GLT8D2Q9H1C3 349 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 VPS16Q9H269 839 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 ADAMTS7Q9UKP4 1686 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 STK10O94804 968 aaKnown RBP10.69□□□□□ -0.7
UFD1-205ENST00000459854 DNM2P50570 870 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 CFAP61Q8NHU2 1237 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
UFD1-205ENST00000459854 VPS33BQ9H267 617 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 ZNF277Q9NRM2 450 aaPredicted RBP10.69□□□□□ -0.7
UFD1-205ENST00000459854 PNMA6AP0CW24 399 aaPredicted RBP10.69□□□□□ -0.7
UFD1-205ENST00000459854 CRY2Q49AN0 593 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 KLHL29Q96CT2 875 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 SLF1Q9BQI6 1058 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 C5P01031 1676 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 LAMB4A4D0S4 1761 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 LMNB2Q03252 620 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 AMIGO3Q86WK7 504 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 DAAM1Q9Y4D1 1078 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 LMNB1P20700 586 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 CLCN6P51797 869 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 KLHL7Q8IXQ5 586 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 INTS9Q9NV88 658 aaKnown RBP10.68□□□□□ -0.7
UFD1-205ENST00000459854 JAG2Q9Y219 1238 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 SNX14Q9Y5W7 946 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 A0A1W2PQ27 194 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 A0A1W2PQ64 194 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 A0A1W2PQD8 194 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 CFAP73A6NFT4 308 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 EIF3CLB5ME19 914 aaKnown RBP10.68□□□□□ -0.7
UFD1-205ENST00000459854 HLA-DOAP06340 250 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 DLGAP5Q15398 846 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 AOC3Q16853 763 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 RUBCNQ92622 972 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 PSMD1Q99460 953 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 EIF3CQ99613 913 aaKnown RBP10.68□□□□□ -0.7
UFD1-205ENST00000459854 GADD45BO75293 160 aaPredicted RBP10.68□□□□□ -0.7
UFD1-205ENST00000459854 HAND2P61296 217 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 PHEXP78562 749 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 ARHGEF18Q6ZSZ5 1173 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 NRBF2Q96F24 287 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 PDGFDQ9GZP0 370 aaPredicted RBP10.68□□□□□ -0.7
UFD1-205ENST00000459854 ZNRF3Q9ULT6 936 aa10.68□□□□□ -0.7
UFD1-205ENST00000459854 ECE2O60344 883 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 LRRC8CQ8TDW0 803 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 TEKT1Q969V4 418 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 SGSM2O43147 1006 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 SASH1O94885 1247 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 HSPA6P17066 643 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 PHKA1P46020 1223 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 GLE1Q53GS7 698 aaKnown RBP10.67□□□□□ -0.7
UFD1-205ENST00000459854 ARHGAP42A6NI28 874 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 TRAF5O00463 557 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 RPSAP08865 295 aaKnown RBP10.67□□□□□ -0.7
UFD1-205ENST00000459854 POLE2P56282 527 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 RAD51AP2Q09MP3 1159 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 KLHL30Q0D2K2 578 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 TSHZ3Q63HK5 1081 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 VTI1AQ96AJ9 217 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 HOOK2Q96ED9 719 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 RILPQ96NA2 401 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 EFHD1Q9BUP0 239 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 ZC4H2Q9NQZ6 224 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 PYCARDQ9ULZ3 195 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 PDE4DQ08499 809 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 TMED8Q6PL24 325 aaPredicted RBP10.67□□□□□ -0.7
UFD1-205ENST00000459854 SIRT2Q8IXJ6 389 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 CCDC13Q8IYE1 715 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 MAGEB6Q8N7X4 407 aa10.67□□□□□ -0.7
UFD1-205ENST00000459854 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
UFD1-205ENST00000459854 TTC36A6NLP5 189 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 ANKRD35Q8N283 1001 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 OSBPL9Q96SU4 736 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 GEMIN8Q9NWZ8 242 aaKnown RBP10.66□□□□□ -0.7
UFD1-205ENST00000459854 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 DBNLQ9UJU6 430 aaKnown RBP10.66□□□□□ -0.7
UFD1-205ENST00000459854 SPECC1L-ADORA2AF8WAN1 911 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 RAD17O75943 681 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 CMA1P23946 247 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
UFD1-205ENST00000459854 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 NAPAP54920 295 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
UFD1-205ENST00000459854 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms