RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GLT8D2Q9H1C3 349 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 PXMP2Q9NR77 195 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 COL20A1Q9P218 1284 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 SMCHD1A6NHR9 2005 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 SYNRGQ9UMZ2 1314 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 MOXD2PA6NHM9 499 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 PIK3CDO00329 1044 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 ADAMTS4O75173 837 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 C6orf222P0C671 652 aaPredicted RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 EIF2AK2P19525 551 aaKnown RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 CST5P28325 142 aaPredicted RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 PDIA3P30101 505 aaKnown RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 CDC27P30260 824 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 HOXA13P31271 388 aaPredicted RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 NKX3-2P78367 333 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 TTLL4Q14679 1199 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 DUSP28Q4G0W2 176 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 GNASQ5JWF2 1037 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 PPP1R18Q6NYC8 613 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 FCHSD1Q86WN1 690 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 UPF3AQ9H1J1 476 aaKnown RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 PDGFCQ9NRA1 345 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 FAM217BQ9NTX9 383 aaPredicted RBP18.6■□□□□ 0.57
CD28-203ENST00000458610 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
CD28-203ENST00000458610 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
CD28-203ENST00000458610 SMPD1P17405 629 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 FUT2Q10981 343 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 TOB2Q14106 344 aaPredicted RBP18.59■□□□□ 0.57
CD28-203ENST00000458610 PRPF38BQ5VTL8 546 aaKnown RBP18.59■□□□□ 0.57
CD28-203ENST00000458610 KCNV1Q6PIU1 500 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
CD28-203ENST00000458610 IL17RAQ96F46 866 aa18.59■□□□□ 0.57
CD28-203ENST00000458610 GNEQ9Y223 722 aaKnown RBP18.59■□□□□ 0.57
CD28-203ENST00000458610 NID2Q14112 1375 aa18.58■□□□□ 0.57
CD28-203ENST00000458610 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 CPLX1O14810 134 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 PRPF3O43395 683 aaKnown RBP18.58■□□□□ 0.56
CD28-203ENST00000458610 STAM2O75886 525 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 CCND2P30279 289 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 KCNA10Q16322 511 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 XRRA1Q6P2D8 792 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 PDCD2LQ9BRP1 358 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
CD28-203ENST00000458610 MYH6P13533 1939 aa18.58■□□□□ 0.56
CD28-203ENST00000458610 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.56
CD28-203ENST00000458610 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 CABYRO75952 493 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 SEC24BO95487 1268 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 MYCLP12524 364 aaPredicted RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 IFNAR1P17181 557 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 ACLYP53396 1101 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 NAPAP54920 295 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 PGM5Q15124 567 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 SLC39A5Q6ZMH5 540 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 LENG1Q96BZ8 264 aaPredicted RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 GLT1D1Q96MS3 346 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 RNF26Q9BY78 433 aaPredicted RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
CD28-203ENST00000458610 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
CD28-203ENST00000458610 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 MEIS2O14770 477 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 SCG2P13521 617 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 CPT1AP50416 773 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
CD28-203ENST00000458610 FSCN1Q16658 493 aaKnown RBP18.56■□□□□ 0.56
CD28-203ENST00000458610 PFKFB3Q16875 520 aaPredicted RBP18.56■□□□□ 0.56
CD28-203ENST00000458610 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 WWC2Q6AWC2 1192 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 MCTP2Q6DN12 878 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 GPKOWQ92917 476 aaPredicted RBP eCLIP18.56■□□□□ 0.56
CD28-203ENST00000458610 FERMT2Q96AC1 680 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 VTI1AQ96AJ9 217 aa18.56■□□□□ 0.56
CD28-203ENST00000458610 ELP1O95163 1332 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 ADCY6O43306 1168 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 KPNA6O60684 536 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 CDKL5O76039 1030 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 FOSP01100 380 aaPredicted RBP18.55■□□□□ 0.56
CD28-203ENST00000458610 ASGR1P07306 291 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 TGFB3P10600 412 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 ADCY7P51828 1080 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 NEK4P51957 841 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
CD28-203ENST00000458610 GNPTABQ3T906 1256 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 C1orf53Q5VUE5 145 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 CCSAPQ6IQ19 270 aaPredicted RBP18.55■□□□□ 0.56
CD28-203ENST00000458610 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 SLKQ9H2G2 1235 aaPredicted RBP18.55■□□□□ 0.56
CD28-203ENST00000458610 RIC8AQ9NPQ8 531 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms