RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SNCBQ16143 134 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 ZNF589Q86UQ0 364 aaPredicted RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 LCA5Q86VQ0 697 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 CDC26Q8NHZ8 85 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 NSFP46459 744 aaKnown RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 COL17A1Q9UMD9 1497 aaPredicted RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 GTPBP6O43824 516 aaPredicted RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 GFPT2O94808 682 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 SLFN13Q68D06 897 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 RNF217Q8TC41 542 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 HVCN1Q96D96 273 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 AP1M1Q9BXS5 423 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 INPP1P49441 399 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 UBE2SQ16763 222 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 CROCCP2Q86T23 111 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 ZSWIM6Q9HCJ5 1215 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 HAUS2Q9NVX0 235 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 EPN1Q9Y6I3 576 aaPredicted RBP21.41■■□□□ 1.02
SNX27-204ENST00000458013 PRKAB2O43741 272 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 HIP1RO75146 1068 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 ALDH1B1P30837 517 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 ZBTB41Q5SVQ8 909 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 ZNF577Q9BSK1 485 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 AS3MTQ9HBK9 375 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 GAS2L3Q86XJ1 694 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 EXT2Q93063 718 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 COA7Q96BR5 231 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 CCDC68Q9H2F9 335 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 HESX1Q9UBX0 185 aa21.41■■□□□ 1.02
SNX27-204ENST00000458013 MRPL11Q9Y3B7 192 aaKnown RBP21.41■■□□□ 1.02
SNX27-204ENST00000458013 CD58P19256 250 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 PDE1BQ01064 536 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 BANK1Q8NDB2 785 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 SUPT20HQ8NEM7 779 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 CCDC51Q96ER9 411 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 SPTLC3Q9NUV7 552 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 INHBAP08476 426 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 GNL1P36915 607 aaPredicted RBP21.4■■□□□ 1.02
SNX27-204ENST00000458013 PLTPP55058 493 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 SMAD1Q15797 465 aaKnown RBP21.4■■□□□ 1.02
SNX27-204ENST00000458013 HABP4Q5JVS0 413 aaKnown RBP21.4■■□□□ 1.02
SNX27-204ENST00000458013 TUBGCP2Q9BSJ2 902 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 ANAPC5Q9UJX4 755 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 MAGOHBQ96A72 148 aaKnown RBP21.4■■□□□ 1.02
SNX27-204ENST00000458013 HOMER3Q9NSC5 361 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 EFCAB8A8MWE9 144 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 SPATA1Q5VX52 437 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 ANGPTL3Q9Y5C1 460 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 TOM1L1O75674 476 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 S100BP04271 92 aaPredicted RBP21.4■■□□□ 1.02
SNX27-204ENST00000458013 LRCH2Q5VUJ6 765 aa21.4■■□□□ 1.02
SNX27-204ENST00000458013 TLR3O15455 904 aaKnown RBP21.39■■□□□ 1.02
SNX27-204ENST00000458013 GARSP41250 739 aaKnown RBP21.39■■□□□ 1.02
SNX27-204ENST00000458013 USPL1Q5W0Q7 1092 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 HACE1Q8IYU2 909 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 ANTXR1Q9H6X2 564 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 ZMYM3Q14202 1370 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 MAPK4P31152 587 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 PRPSAP1Q14558 356 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 ABCB5Q2M3G0 1257 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 ADPGKQ9BRR6 497 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 UBN1Q9NPG3 1134 aa21.39■■□□□ 1.02
SNX27-204ENST00000458013 KRT1P04264 644 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 CMA1P23946 247 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 MARK3P27448 753 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 USP44Q9H0E7 712 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 PCDHA1Q9Y5I3 950 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 EDC4Q6P2E9 1401 aaKnown RBP21.39■■□□□ 1.01
SNX27-204ENST00000458013 PASKQ96RG2 1323 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 GOLGA8IPA6NC78 632 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 GOLGA8JA6NMD2 632 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 HNRNPDLO14979 420 aaKnown RBP21.39■■□□□ 1.01
SNX27-204ENST00000458013 C7orf31Q8N865 590 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 ZBBXA8MT70 800 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 GNGT2O14610 69 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 BNIP3LO60238 219 aa21.39■■□□□ 1.01
SNX27-204ENST00000458013 DDIT3P35638 169 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 ATP6V1E2Q96A05 226 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 IRAK4Q9NWZ3 460 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 FAN1Q9Y2M0 1017 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 PHEXP78562 749 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 SCYL3Q8IZE3 742 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 DBNDD1Q9H9R9 158 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 MAN1B1Q9UKM7 699 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 SART1O43290 800 aaKnown RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 FAM26FQ5R3K3 315 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 PI16Q6UXB8 463 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 BEGAINQ9BUH8 593 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 NR2F2P24468 414 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 HDLBPQ00341 1268 aaKnown RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 HSPH1Q92598 858 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 UBE2TQ9NPD8 197 aaPredicted RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 CD2BP2O95400 341 aaKnown RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 GYS2P54840 703 aa21.38■■□□□ 1.01
SNX27-204ENST00000458013 BASP1P80723 227 aaKnown RBP21.38■■□□□ 1.01
SNX27-204ENST00000458013 PHLDB3Q6NSJ2 640 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms