RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RFXAPO00287 272 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 CTAGE5O15320 804 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 IQSEC1Q6DN90 963 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 SCLYQ96I15 445 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 UBA5Q9GZZ9 404 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 TSPYL2Q9H2G4 693 aaPredicted RBP18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 CPVLQ9H3G5 476 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 CNNM2Q9H8M5 875 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 GNEQ9Y223 722 aaKnown RBP18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 TNKSO95271 1327 aa18.42■□□□□ 0.54
CHCHD3-204ENST00000457942 CD4P01730 458 aa18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 PDE4AP27815 886 aa18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 PSMC6P62333 389 aa18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 PDE4DQ08499 809 aa18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 CDC37Q16543 378 aaPredicted RBP18.41■□□□□ 0.54
CHCHD3-204ENST00000457942 MYO9BQ13459 2157 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 B4GALT4O60513 344 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 CABYRO75952 493 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 KRT40Q6A162 431 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 TAPT1Q6NXT6 567 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 RUFY2Q8WXA3 655 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 CLEC4DQ8WXI8 215 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 RAD50Q92878 1312 aa18.4■□□□□ 0.54
CHCHD3-204ENST00000457942 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 BMP1P13497 986 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 TRDNQ13061 729 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 ITGA7Q13683 1181 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 IFIT1BQ5T764 474 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 MORC4Q8TE76 937 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 WDR11Q9BZH6 1224 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 IL25Q9H293 177 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
CHCHD3-204ENST00000457942 B4DLN1 442 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 NKX3-2P78367 333 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 DUSP28Q4G0W2 176 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 TMEM63BQ5T3F8 832 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 DEFB128Q7Z7B8 93 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 C1QTNF1Q9BXJ1 281 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 Q9Y3F1 56 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 GRIN2DO15399 1336 aa18.38■□□□□ 0.53
CHCHD3-204ENST00000457942 CA3P07451 260 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 ATP2A2P16615 1042 aaKnown RBP18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 PPP1R13LQ8WUF5 828 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 EPHX3Q9H6B9 360 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 ABCB11O95342 1321 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 NCOR1O75376 2440 aa18.37■□□□□ 0.53
CHCHD3-204ENST00000457942 FAM86C2PA6NEL3 165 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 EPOPA6NHQ4 379 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 MYL3P08590 195 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 CPT1AP50416 773 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 COL4A4P53420 1690 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 SLC43A3Q8NBI5 491 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 DNERQ8NFT8 737 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 PCDHA11Q9Y5I1 949 aa18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-204ENST00000457942 CYP2C9P11712 490 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 QRICH1Q2TAL8 776 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 MCF2L2Q86YR7 1114 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 SCFD2Q8WU76 684 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 TRMT13Q9NUP7 481 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 HCN4Q9Y3Q4 1203 aa18.35■□□□□ 0.53
CHCHD3-204ENST00000457942 ERICH2A1L162 156 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 GTPBP6O43824 516 aaPredicted RBP18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 ARHGEF15O94989 841 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 CHMLP26374 656 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 AAK1Q2M2I8 961 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 ARNTL2Q8WYA1 636 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 VWCEQ96DN2 955 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 LRFN3Q9BTN0 628 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 MTCH2Q9Y6C9 303 aa18.34■□□□□ 0.53
CHCHD3-204ENST00000457942 SCN5AQ14524 2016 aa18.33■□□□□ 0.53
CHCHD3-204ENST00000457942 NKRFO15226 690 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 EDNRBP24530 442 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 PTH1RQ03431 593 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms