RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 CLIC2O15247 247 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 CRCPO75575 148 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 GPR162Q16538 588 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 GABPB2Q8TAK5 448 aaPredicted RBP12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 SPC25Q9HBM1 224 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 HESX1Q9UBX0 185 aa12.84□□□□□ -0.35
SMARCAD1-204ENST00000457823 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.35
SMARCAD1-204ENST00000457823 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ATP1A2P50993 1020 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 GUCY2DQ02846 1103 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 GIPC1O14908 333 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 STX2P32856 288 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 MAN1A1P33908 653 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 CDK8P49336 464 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 PTK2Q05397 1052 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 MESDQ14696 234 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 PALM2Q8IXS6 379 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 MCUR1Q96AQ8 359 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 MYO1FO00160 1098 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 PLEKHA8P1O95397 391 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 MAN2A1Q16706 1144 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 GKAP1Q5VSY0 366 aaPredicted RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 TAB3Q8N5C8 712 aaPredicted RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ATP6V0A1Q93050 837 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 SLC5A4Q9NY91 659 aa12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 ZNF335Q9H4Z2 1342 aaPredicted RBP12.83□□□□□ -0.36
SMARCAD1-204ENST00000457823 CIB2O75838 187 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PRDX5P30044 214 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 GRAPQ13588 217 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 SLC7A3Q8WY07 619 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 ARHGEF2Q92974 986 aaKnown RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 WDR11Q9BZH6 1224 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 STK17AQ9UEE5 414 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 CAPN9O14815 690 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 GMNNO75496 209 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 TMOD1P28289 359 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 UBE2SQ16763 222 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 BZW2Q9Y6E2 419 aaKnown RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 RNF8O76064 485 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PLCG1P19174 1290 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 ATP11AP98196 1134 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 LLGL1Q15334 1064 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 LRRN2O75325 713 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 CCNE1P24864 410 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 KRT81Q14533 505 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 KCTD2Q14681 263 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 RABGGTAQ92696 567 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 NACC1Q96RE7 527 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 KRT12Q99456 494 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
SMARCAD1-204ENST00000457823 I3L4J1 428 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 PPFIA4O75335 1185 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 TPD52P55327 224 aaPredicted RBP12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 GNGT1P63211 74 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 ZSCAN26Q16670 478 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 PCIF1Q9H4Z3 704 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 RNF40O75150 1001 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 CDC25BP30305 580 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 MYL7Q01449 175 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 INO80B-WBP1J3KQ70 363 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 SH3BP5O60239 455 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 CNGA1P29973 690 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 STAT2P52630 851 aa12.81□□□□□ -0.36
SMARCAD1-204ENST00000457823 KAZNQ674X7 775 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms