RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SRFP11831 508 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 GLDCP23378 1020 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
VPS41-209ENST00000457055 RAPGEF1Q13905 1077 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 TAF1CQ15572 869 aaPredicted RBP6.43□□□□□ -1.38
VPS41-209ENST00000457055 ALDH1L2Q3SY69 923 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 C1QTNF12Q5T7M4 302 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 CATIPQ7Z7H3 387 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 TSPYL5Q86VY4 417 aaPredicted RBP6.43□□□□□ -1.38
VPS41-209ENST00000457055 FAM43AQ8N2R8 423 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 PHC3Q8NDX5 983 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 GOLGA1Q92805 767 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 TINF2Q9BSI4 451 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 PDCL3Q9H2J4 239 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 C19orf44Q9H6X5 657 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 ACAD8Q9UKU7 415 aa6.43□□□□□ -1.38
VPS41-209ENST00000457055 MRPL42Q9Y6G3 142 aaKnown RBP6.43□□□□□ -1.38
VPS41-209ENST00000457055 SETD1AO15047 1707 aaKnown RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 WDR7Q9Y4E6 1490 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 MPHOSPH10O00566 681 aaKnown RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 TPM2P07951 284 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 ZGLP1P0C6A0 271 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 TGFB3P10600 412 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 NAT1P18440 290 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 TRAPPC10P48553 1259 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 DCTN1Q14203 1278 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 CIAPIN1Q6FI81 312 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 CCDC70Q6NSX1 233 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 BNC2Q6ZN30 1099 aaPredicted RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 OXR1Q8N573 874 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 NGEFQ8N5V2 710 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 SAMD3Q8N6K7 520 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 KCNN1Q92952 543 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 RELTQ969Z4 430 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 TTC14Q96N46 770 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 OSBPL2Q9H1P3 480 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 ALDH8A1Q9H2A2 487 aaPredicted RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 CAPN10Q9HC96 672 aa6.42□□□□□ -1.38
VPS41-209ENST00000457055 ZNF335Q9H4Z2 1342 aaPredicted RBP6.42□□□□□ -1.38
VPS41-209ENST00000457055 F6X3S4 739 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 KIF5CO60282 957 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 CILPO75339 1184 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 IGHDP01880 384 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 NBPF7P0C2Y1 421 aaPredicted RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 PDE6BP35913 854 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 TNNI2P48788 182 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 CLK1P49759 484 aaKnown RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 EIF5P55010 431 aaKnown RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 DAB2P98082 770 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 WASHC5Q12768 1159 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 TMEM201Q5SNT2 666 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 CCDC84Q86UT8 332 aaPredicted RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 LILRA2Q8N149 483 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 NDUFAF2Q8N183 169 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 CCDC94Q9BW85 323 aaPredicted RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 C22orf23Q9BZE7 217 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 SP110Q9HB58 689 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 AS3MTQ9HBK9 375 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 TYW1Q9NV66 732 aaKnown RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 POLG2Q9UHN1 485 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 ASAP1Q9ULH1 1129 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 SMG5Q9UPR3 1016 aaKnown RBP6.41□□□□□ -1.38
VPS41-209ENST00000457055 ZNF652Q9Y2D9 606 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 PCDHA11Q9Y5I1 949 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 FANCIQ9NVI1 1328 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 PTPRTO14522 1441 aa6.41□□□□□ -1.38
VPS41-209ENST00000457055 FRMPD1Q5SYB0 1578 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 CCDC163A0A0D9SF12 145 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 FITM1A5D6W6 292 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 KIF3BO15066 747 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 TBX3O15119 743 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 CAND2O75155 1236 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 LRRN2O75325 713 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 RBP3P10745 1247 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 RRM1P23921 792 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 GNALP38405 381 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 CASP2P42575 452 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 LINC00310P59036 64 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 RBL2Q08999 1139 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 RAD51AP2Q09MP3 1159 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 IFT88Q13099 833 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 LONRF1Q17RB8 773 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 PPP4R4Q6NUP7 873 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 FBXO33Q7Z6M2 555 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 TEX19Q8NA77 164 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 APBA2Q99767 749 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 SLC6A17Q9H1V8 727 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 TMCC3Q9ULS5 477 aa6.4□□□□□ -1.38
VPS41-209ENST00000457055 FAM221AA4D161 298 aa6.39□□□□□ -1.39
VPS41-209ENST00000457055 GOLGA6L3A6NEY3 463 aa6.39□□□□□ -1.39
VPS41-209ENST00000457055 TRIM64CA6NLI5 447 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms