RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PAGE5Q96GU1 130 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TRERF1Q96PN7 1200 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CSRNP2Q9H175 543 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
CHCHD4P3-201ENST00000455954 MYH1P12882 1939 aa11.21□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GAKO14976 1311 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ERICH2A1L162 156 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LDHCP07864 332 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CASP14P31944 242 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TM4SF4P48230 202 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TRAPPC10P48553 1259 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 KRT83P78385 493 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GSTO1P78417 241 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MECOMQ03112 1051 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 WTAPQ15007 396 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 DNAJC21Q5F1R6 531 aaKnown RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PI16Q6UXB8 463 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ZNF572Q7Z3I7 529 aaPredicted RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 COG1Q8WTW3 980 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NAPBQ9H115 298 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 FAM204AQ9H8W3 233 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 RNF186Q9NXI6 227 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LAMB1P07942 1786 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ZNF532Q9HCE3 1301 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TRIM66O15016 1216 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 RNF40O75150 1001 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TRPA1O75762 1119 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MYL1P05976 194 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 KRT2P35908 639 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ERVK-24P63145 666 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 KRT31Q15323 416 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 SPATS2Q86XZ4 545 aaKnown RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 IFNL3Q8IZI9 196 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NACAP1Q9BZK3 213 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ZSWIM4Q9H7M6 989 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GEMIN8Q9NWZ8 242 aaKnown RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 HPCAL4Q9UM19 191 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 EPN1Q9Y6I3 576 aaPredicted RBP11.19□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GOLGA8KD6RF30 607 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 N4BP3O15049 544 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PRPF3O43395 683 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NDUFA10O95299 355 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 SYF2O95926 243 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 RHOXF2BP0C7M4 288 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CALM1P0DP23 149 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CALM2P0DP24 149 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CALM3P0DP25 149 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PCP11498 1178 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GUCY2CP25092 1073 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 USP8P40818 1118 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PPP1R2P41236 205 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 BTDP43251 543 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NT5C2P49902 561 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 GYS2P54840 703 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 INHBEP58166 350 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CDK17Q00537 523 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TCP10Q12799 353 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 NFIAQ12857 509 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PAK1Q13153 545 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 STIM1Q13586 685 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 SWT1Q5T5J6 900 aaKnown RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ZNF658Q5TYW1 1059 aaPredicted RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 CCDC170Q8IYT3 715 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 ACRBPQ8NEB7 543 aa11.18□□□□□ -0.62
CHCHD4P3-201ENST00000455954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms