RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PHLDB1Q86UU1 1377 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 TRBV23OR9-2A0A075B6M9 112 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 TMEM82A0PJX8 343 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 MSCO60682 206 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 GSTM1P09488 218 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 JMJD7P0C870 316 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 ENDOUP21128 410 aaKnown RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 FLT3P36888 993 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 NEK4P51957 841 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 EXOSC10Q01780 885 aaKnown RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 GUCY1A3Q02108 690 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 BNIP3Q12983 259 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 IFI16Q16666 785 aaKnown RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 CDCA2Q69YH5 1023 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 OGFOD2Q6N063 350 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 UBE2R2Q712K3 238 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 FERMT3Q86UX7 667 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 KSR1Q8IVT5 923 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 PLD6Q8N2A8 252 aaKnown RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 NETO1Q8TDF5 533 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 LEO1Q8WVC0 666 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 DIO2Q92813 273 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 UBE2FQ969M7 185 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 FOXP3Q9BZS1 431 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 ZSWIM5Q9P217 1185 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCDHA8Q9Y5H6 950 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 PITPNM2Q9BZ72 1349 aa5.19□□□□□ -1.58
HMGB1P15-201ENST00000453854 TMEM265A0A087WTH1 108 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 H3BS24 57 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 MARCH6O60337 910 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 ESR1P03372 595 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CKMP06732 381 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 LCP1P13796 627 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CPEP16870 476 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 BPIP17213 487 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 PAMP19021 973 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CD96P40200 585 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CEBPAP49715 358 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 EVA1CP58658 441 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 TEKQ02763 1124 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CFAP100Q494V2 611 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 BRDTQ58F21 947 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 MBLAC2Q68D91 279 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCDH19Q8TAB3 1148 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 PTCHD1Q96NR3 888 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 CDIP1Q9H305 208 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 AP5S1Q9NUS5 200 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 DUSP13Q9UII6 198 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
HMGB1P15-201ENST00000453854 NPHP3-ACAD11A0A0J9YXS1 232 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 BRINP1O60477 761 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 KPNA6O60684 536 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 PAPLNO95428 1278 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 PARNO95453 639 aaKnown RBP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 YBX3P16989 372 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 PAK1Q13153 545 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 INF2Q27J81 1249 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 WWC2Q6AWC2 1192 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 CYP2R1Q6VVX0 501 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 ARHGAP27Q6ZUM4 889 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 NECAB2Q7Z6G3 386 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 DDX53Q86TM3 631 aaKnown RBP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 MTDHQ86UE4 582 aaKnown RBP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 AGBL5Q8NDL9 886 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 TMEM52Q8NDY8 209 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 ATL2Q8NHH9 583 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 WNK4Q96J92 1243 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 CELF4Q9BZC1 486 aaKnown RBP5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 SAMD15Q9P1V8 674 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 SLC5A6Q9Y289 635 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 PCDHA11Q9Y5I1 949 aa5.17□□□□□ -1.58
HMGB1P15-201ENST00000453854 CBX4O00257 560 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 GPR39O43194 453 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 ZEB2O60315 1214 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 GLRX3O76003 335 aaKnown RBP5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 TBC1D8O95759 1140 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 F2P00734 622 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 MECP2P51608 486 aaKnown RBP5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 STRN3Q13033 797 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 KIZQ2M2Z5 673 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 PIK3R6Q5UE93 754 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 RNF219Q5W0B1 726 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 ALG1Q9BT22 464 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 ATP13A1Q9HD20 1204 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 ERVK13-1Q9NX77 482 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 ADAMTS6Q9UKP5 1117 aa5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 THRAP3Q9Y2W1 955 aaKnown RBP5.16□□□□□ -1.58
HMGB1P15-201ENST00000453854 SSU72P8A0A1W2PR75 194 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 C7orf72A4D263 438 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 TRAF5O00463 557 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 APPP05067 770 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 CD8BP10966 210 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 LTKP29376 864 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 DSG1Q02413 1049 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 EGR3Q06889 387 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 STAT4Q14765 748 aa5.15□□□□□ -1.59
HMGB1P15-201ENST00000453854 PLCL1Q15111 1095 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms