RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 STAG2Q8N3U4 1231 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 TUBGCP6Q96RT7 1819 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 FMN2Q9NZ56 1722 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 TMOD1P28289 359 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 TRAPPC10P48553 1259 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 RGPD8O14715 1765 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 TCRBV5S4A2TA0A5A2 114 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 A6NNZ2 444 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 PPP1R37O75864 691 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 OR52Z1P0C646 297 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 FAM153BP0C7A2 387 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 TUBB8Q3ZCM7 444 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 FAM153CQ494X1 144 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 CACNA2D3Q8IZS8 1091 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 ZNF473Q8WTR7 871 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 FAM153AQ9UHL3 310 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 MEGF6O75095 1541 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 CLTAP09496 248 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 KRT13P13646 458 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 NONOQ15233 471 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 VWA3BQ502W6 1294 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 DAAM2Q86T65 1068 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 C6orf50Q9HD87 102 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 SMCO2A6NFE2 343 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 EIF6P56537 245 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 GEMIN8Q9NWZ8 242 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 NEBLO76041 1014 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 DDAH1O94760 285 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 GLI1P08151 1106 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 TTMPQ5BVD1 217 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 CCDC25Q86WR0 208 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 IRF2BP1Q8IU81 584 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 PIGBQ92521 554 aa15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 PDS5AQ29RF7 1337 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-210ENST00000453744 USP17L3A6NCW0 530 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 USP17L4A6NCW7 530 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 USP17L8P0C7I0 530 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 KIRREL3Q8IZU9 778 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 LRRC45Q96CN5 670 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 TACO1Q9BSH4 297 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 KRIT1O00522 736 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 PDE6BP35913 854 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 IFNAR2P48551 515 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 GNAQP50148 359 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 TROAPQ12815 778 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 ASIC2Q16515 512 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 ADGRA1Q86SQ6 560 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 ARHGAP20Q9P2F6 1191 aa15.27■□□□□ 0.04
UBE2D3-210ENST00000453744 EVX2Q03828 476 aa15.27■□□□□ 0.03
UBE2D3-210ENST00000453744 SNCBQ16143 134 aa15.27■□□□□ 0.03
UBE2D3-210ENST00000453744 MAN2A1Q16706 1144 aa15.27■□□□□ 0.03
UBE2D3-210ENST00000453744 KLC4Q9NSK0 619 aa15.27■□□□□ 0.03
UBE2D3-210ENST00000453744 CHUKO15111 745 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 KSR1Q8IVT5 923 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 MMGT1Q8N4V1 131 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 DDX47Q9H0S4 455 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 ABCC6O95255 1503 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 HIBCHQ6NVY1 386 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 VPS36Q86VN1 386 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 NEDD9Q14511 834 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 IL17AQ16552 155 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 PEX26Q7Z412 305 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 EPN3Q9H201 632 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 ATP8A1Q9Y2Q0 1164 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 LLGL1Q15334 1064 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 MGARPQ8TDB4 240 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
UBE2D3-210ENST00000453744 FAM205AQ6ZU69 1335 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 KLRF2D3W0D1 207 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 SEC23AQ15436 765 aa15.25■□□□□ 0.03
UBE2D3-210ENST00000453744 TRADDQ15628 312 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms