RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
VPS16-205ENST00000453689 CDC27P30260 824 aa16.91■□□□□ 0.3
VPS16-205ENST00000453689 TNFAIP2Q03169 654 aa16.91■□□□□ 0.3
VPS16-205ENST00000453689 FUT2Q10981 343 aa16.91■□□□□ 0.3
VPS16-205ENST00000453689 NSUN6Q8TEA1 469 aaKnown RBP16.91■□□□□ 0.3
VPS16-205ENST00000453689 RMDN3Q96TC7 470 aa16.91■□□□□ 0.3
VPS16-205ENST00000453689 SENP6Q9GZR1 1112 aaPredicted RBP16.91■□□□□ 0.3
VPS16-205ENST00000453689 B4DLN1 442 aa16.9■□□□□ 0.3
VPS16-205ENST00000453689 HOXA13P31271 388 aaPredicted RBP16.9■□□□□ 0.3
VPS16-205ENST00000453689 METAP2P50579 478 aaKnown RBP eCLIP16.9■□□□□ 0.3
VPS16-205ENST00000453689 MRPL12P52815 198 aaKnown RBP16.9■□□□□ 0.3
VPS16-205ENST00000453689 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
VPS16-205ENST00000453689 IQSEC1Q6DN90 963 aa16.9■□□□□ 0.3
VPS16-205ENST00000453689 RNF180Q86T96 592 aa16.9■□□□□ 0.3
VPS16-205ENST00000453689 ZNF274Q96GC6 653 aaPredicted RBP16.9■□□□□ 0.3
VPS16-205ENST00000453689 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
VPS16-205ENST00000453689 PXMP2Q9NR77 195 aa16.9■□□□□ 0.3
VPS16-205ENST00000453689 DNAH12Q6ZR08 3092 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 RBM47A0AV96 593 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 MYADML2A6NDP7 307 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 POLR2MP0CAP2 368 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 SMPD1P17405 629 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 EIF2AK2P19525 551 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 PTGS1P23219 599 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 PDIA3P30101 505 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 GJA9P57773 515 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 TMEM63BQ5T3F8 832 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 KLHDC9Q8NEP7 349 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 TPCN1Q9ULQ1 816 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
VPS16-205ENST00000453689 LTBP2Q14767 1821 aa16.89■□□□□ 0.29
VPS16-205ENST00000453689 EVI5O60447 810 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
VPS16-205ENST00000453689 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
VPS16-205ENST00000453689 MCM2P49736 904 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
VPS16-205ENST00000453689 TLK2Q86UE8 772 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 FERMT2Q96AC1 680 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 SPC25Q9HBM1 224 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
VPS16-205ENST00000453689 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 CTAGE5O15320 804 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 NR3C2P08235 984 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 ATN1P54259 1190 aaPredicted RBP16.87■□□□□ 0.29
VPS16-205ENST00000453689 NKX3-2P78367 333 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
VPS16-205ENST00000453689 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 GPKOWQ92917 476 aaPredicted RBP eCLIP16.87■□□□□ 0.29
VPS16-205ENST00000453689 PDCD2LQ9BRP1 358 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 TSEN34Q9BSV6 310 aaKnown RBP16.87■□□□□ 0.29
VPS16-205ENST00000453689 WDR11Q9BZH6 1224 aa16.87■□□□□ 0.29
VPS16-205ENST00000453689 V9GY48 417 aaPredicted RBP16.87■□□□□ 0.29
VPS16-205ENST00000453689 A0A1W2PQ45 241 aaPredicted RBP16.86■□□□□ 0.29
VPS16-205ENST00000453689 A0A1W2PQY0 241 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 H0YGN5 161 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 PFKFB2O60825 505 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 PGM5Q15124 567 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 STXBP2Q15833 593 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 KCNA10Q16322 511 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 DUSP28Q4G0W2 176 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 C7orf61Q8IZ16 206 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 SCFD2Q8WU76 684 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 ZSCAN31Q96LW9 406 aaPredicted RBP16.86■□□□□ 0.29
VPS16-205ENST00000453689 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
VPS16-205ENST00000453689 Q9Y3F1 56 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 NR2E3Q9Y5X4 410 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 FRMPD4Q14CM0 1322 aa16.86■□□□□ 0.29
VPS16-205ENST00000453689 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 MEIS2O14770 477 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 DYNC1LI2O43237 492 aaPredicted RBP16.85■□□□□ 0.29
VPS16-205ENST00000453689 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
VPS16-205ENST00000453689 LARGE1O95461 756 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 ACLYP53396 1101 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 CCT2P78371 535 aaKnown RBP16.85■□□□□ 0.29
VPS16-205ENST00000453689 BEX3Q00994 111 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 STK3Q13188 491 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 ME3Q16798 604 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 SLC39A5Q6ZMH5 540 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 SMARCC2Q8TAQ2 1214 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 CUL5Q93034 780 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 AP5M1Q9H0R1 490 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 NCOA5Q9HCD5 579 aaKnown RBP16.85■□□□□ 0.29
VPS16-205ENST00000453689 SH2B1Q9NRF2 756 aaPredicted RBP16.85■□□□□ 0.29
VPS16-205ENST00000453689 SCN10AQ9Y5Y9 1956 aa16.85■□□□□ 0.29
VPS16-205ENST00000453689 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms