RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 KRT79Q5XKE5 535 aa19.96■□□□□ 0.79
CTSB-204ENST00000453527 SPDYE3A6NKU9 549 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 PIK3CDO00329 1044 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 MARCH6O60337 910 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 SAMD7Q7Z3H4 446 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 GIMAP8Q8ND71 665 aaPredicted RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 GLIS2Q9BZE0 524 aaPredicted RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 RANBP17Q9H2T7 1088 aaKnown RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 KCNMB3Q9NPA1 279 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 BLOC1S4Q9NUP1 217 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 CNOT7Q9UIV1 285 aaKnown RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 A0A1B0GTH6 734 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 SFPQP23246 707 aaKnown RBP eCLIP19.95■□□□□ 0.78
CTSB-204ENST00000453527 NR1I3Q14994 352 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 DNTTIP2Q5QJE6 756 aaKnown RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 SV2BQ7L1I2 683 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 APTXQ7Z2E3 356 aaKnown RBP19.95■□□□□ 0.78
CTSB-204ENST00000453527 FAM160B2Q86V87 743 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 ADSSL1Q8N142 457 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 SNX29Q8TEQ0 813 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 NELFBQ8WX92 580 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 CDK5RAP3Q96JB5 506 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 NUDT12Q9BQG2 462 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 GJA3Q9Y6H8 435 aa19.95■□□□□ 0.78
CTSB-204ENST00000453527 SREBF1P36956 1147 aa19.94■□□□□ 0.78
CTSB-204ENST00000453527 ZYXQ15942 572 aaKnown RBP19.94■□□□□ 0.78
CTSB-204ENST00000453527 CCDC47Q96A33 483 aaKnown RBP19.94■□□□□ 0.78
CTSB-204ENST00000453527 TAL1P17542 331 aaPredicted RBP19.93■□□□□ 0.78
CTSB-204ENST00000453527 TPD52L1Q16890 204 aaPredicted RBP19.93■□□□□ 0.78
CTSB-204ENST00000453527 GJA10Q969M2 543 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 KIFC2Q96AC6 838 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 CTAGE1Q96RT6 745 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 FEM1BQ9UK73 627 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 MAPK8IP1Q9UQF2 711 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 Q4G0T1 1027 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 TBC1D10BQ4KMP7 808 aaPredicted RBP19.93■□□□□ 0.78
CTSB-204ENST00000453527 TMEM119Q4V9L6 283 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 LARP4BQ92615 738 aaKnown RBP19.93■□□□□ 0.78
CTSB-204ENST00000453527 GTPBP4Q9BZE4 634 aaKnown RBP19.93■□□□□ 0.78
CTSB-204ENST00000453527 HACL1Q9UJ83 578 aa19.93■□□□□ 0.78
CTSB-204ENST00000453527 PSDA5PKW4 1024 aaPredicted RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 HOXA13P31271 388 aaPredicted RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 ASIC1P78348 528 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 STIM1Q13586 685 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 RAD54LQ92698 747 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 R3HCC1Q9Y3T6 440 aaKnown RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 TBX3O15119 743 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 COBLO75128 1261 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 CIITAP33076 1130 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 TERF1P54274 439 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 TBX2Q13207 712 aaPredicted RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 MCM6Q14566 821 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 HYIQ5T013 277 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 SPECC1LQ69YQ0 1117 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 CCDC174Q6PII3 467 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 NLGN2Q8NFZ4 835 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 ZNF341Q9BYN7 854 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 DEFB129Q9H1M3 183 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 GINM1Q9NU53 330 aa19.92■□□□□ 0.78
CTSB-204ENST00000453527 ADD3Q9UEY8 706 aaKnown RBP19.92■□□□□ 0.78
CTSB-204ENST00000453527 ASTN2O75129 1339 aaPredicted RBP19.91■□□□□ 0.78
CTSB-204ENST00000453527 LRRC10BA6NIK2 292 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 H7C1D1 291 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 PDE4DQ08499 809 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 KIF4BQ2VIQ3 1234 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 PRR16Q569H4 304 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 ETNPPLQ8TBG4 499 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 FEZ1Q99689 392 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 EXOC1Q9NV70 894 aa19.91■□□□□ 0.78
CTSB-204ENST00000453527 PSMA7O14818 248 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 SLC26A4O43511 780 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 CTNND1O60716 968 aaKnown RBP19.9■□□□□ 0.78
CTSB-204ENST00000453527 CYP3A4P08684 503 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 LENG9Q96B70 501 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 DHTKD1Q96HY7 919 aaPredicted RBP19.9■□□□□ 0.78
CTSB-204ENST00000453527 LRRC27Q9C0I9 530 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 NT5C3AQ9H0P0 336 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 KCND1Q9NSA2 647 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 ZNF541Q9H0D2 1346 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 KDM3AQ9Y4C1 1321 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 PVALEFA0A1B0GWK0 134 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 MYMKA6NI61 221 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 FAM86B1E9PN63 330 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 NRDCO43847 1150 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 FAM86B2P0C5J1 330 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 SPAG1Q07617 926 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 ECM1Q16610 540 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 CNNM4Q6P4Q7 775 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 KCNK18Q7Z418 384 aa19.9■□□□□ 0.78
CTSB-204ENST00000453527 LIMA1Q9UHB6 759 aaKnown RBP19.9■□□□□ 0.78
CTSB-204ENST00000453527 MRPL11Q9Y3B7 192 aaKnown RBP19.9■□□□□ 0.78
CTSB-204ENST00000453527 PPP1R2P41236 205 aa19.89■□□□□ 0.77
CTSB-204ENST00000453527 STK4Q13043 487 aa19.89■□□□□ 0.77
CTSB-204ENST00000453527 FILIP1LQ4L180 1135 aa19.89■□□□□ 0.77
CTSB-204ENST00000453527 LPAR1Q92633 364 aa19.89■□□□□ 0.77
CTSB-204ENST00000453527 KIAA1683Q9H0B3 1180 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms