RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 LRRC43Q8N309 656 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SUGCTQ9HAC7 445 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 ARMCX3Q9UH62 379 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SYNJ2BP-COX16A0A087WUM0 186 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 ATP1A1P05023 1023 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 ATP2A2P16615 1042 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 RASGRF1Q13972 1273 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SCARF1Q14162 830 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 TMED2Q15363 201 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 DLGAP5Q15398 846 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 LIN9Q5TKA1 542 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SLC44A5Q8NCS7 719 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 COX16Q9P0S2 106 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 PCDHA4Q9UN74 947 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 PCDHA12Q9UN75 941 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 UBE2Q2LH0YL09 131 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 PLCG1P19174 1290 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 CLUL1Q15846 466 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 MIER3Q7Z3K6 550 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 PLAAQ9Y263 795 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 CTTNBP2Q8WZ74 1663 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 NDC80O14777 642 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 RAD17O75943 681 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SAT1P21673 171 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 CCDC84Q86UT8 332 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 N4BP1O75113 896 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 ATP5DP30049 168 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 DYNLT1P63172 113 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 MYCBPQ99417 103 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 TSKSQ9UJT2 592 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 JRKLQ9Y4A0 524 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 THAP12O43422 761 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 VSNL1P62760 191 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 FMR1Q06787 632 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■■□□ 15.5
RIF1-206ENST00000453091 TRPC3Q13507 836 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 MAP7D1Q3KQU3 841 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 SYCE1Q8N0S2 351 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 HAUS1Q96CS2 278 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 TRIM6Q9C030 488 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 CPSF2Q9P2I0 782 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 IRX4P78413 519 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 RPAINQ86UA6 219 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 PPP1R2P41236 205 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 KIF11P52732 1056 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 PDE1CQ14123 709 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 RCN2Q14257 317 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 RESP18Q5W5W9 173 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 E4F1Q66K89 784 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 NLRP10Q86W26 655 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 GSDMAQ96QA5 445 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 MED4Q9NPJ6 270 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 EXOC3L4Q17RC7 722 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 ZNF449Q6P9G9 518 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 RNF10Q8N5U6 811 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 SERPINB2P05120 415 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 NR2F2P24468 414 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 HOXA13P31271 388 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 EPHB4P54760 987 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 IFRD2Q12894 506 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 UBE3CQ15386 1083 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 GEN1Q17RS7 908 aa8.48□□□□□ -1.05
RIF1-206ENST00000453091 LARP4BQ92615 738 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 FOXP1Q9H334 677 aaPredicted RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 INTS9Q9NV88 658 aaKnown RBP8.48□□□□□ -1.05
RIF1-206ENST00000453091 MLH3Q9UHC1 1453 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SESTD1Q86VW0 696 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 ZNF668Q96K58 619 aaPredicted RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 LONP1P36776 959 aaKnown RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 STRN3Q13033 797 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 HIBCHQ6NVY1 386 aaPredicted RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 PALM2Q8IXS6 379 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 RAB3IL1Q8TBN0 382 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 PICK1Q9NRD5 415 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 KLHL14Q9P2G3 628 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 ADAMTS1Q9UHI8 967 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SAMD9LQ8IVG5 1584 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 GAS7O60861 476 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 CTTNQ14247 550 aaKnown RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 CCDC62Q6P9F0 684 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SARM1Q6SZW1 724 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 RNF169Q8NCN4 708 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 DDX12PQ92771 950 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 RNF34Q969K3 372 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 MMS19Q96T76 1030 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SEPT10Q9P0V9 454 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms